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authorMuriithi Frederick Muriuki2021-09-01 06:18:20 +0300
committerMuriithi Frederick Muriuki2021-09-01 06:42:51 +0300
commit221c773daea839ecf0e50c196484bb91e3a6db33 (patch)
tree50e139dd0bbed18e1771fcfcd3dd0195ec78efe7 /gn3/computations
parentb5e1d1176f1bf4f7c0b68b27beb15e99418f1650 (diff)
downloadgenenetwork3-221c773daea839ecf0e50c196484bb91e3a6db33.tar.gz
Implement parsing of genotype labels
Issue:
https://github.com/genenetwork/gn-gemtext-threads/blob/main/topics/gn1-migration-to-gn2/clustering.gmi

* gn3/db/genotypes.py: parse genotype labels
* tests/unit/db/test_genotypes.py: test that genotype labels are parsed
  correctly

  As part of parsing the genotype files into usable python data structures,
  this commit adds a function to parse the label lines (beginning with "@")
  into the appropriate values.
Diffstat (limited to 'gn3/computations')
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