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authorMuriithi Frederick Muriuki2021-09-08 06:52:01 +0300
committerMuriithi Frederick Muriuki2021-09-08 07:02:20 +0300
commit31ca02d1f095c2cc667e5b7d49131d702982f321 (patch)
tree734f3a379fac6f8648a9228fb6f89f30ea2952b9 /gn3/computations/slink.py
parentd4943f1d01d89a3928c905f80914a23144126c8e (diff)
downloadgenenetwork3-31ca02d1f095c2cc667e5b7d49131d702982f321.tar.gz
Fix the traits order computations for clustering
Issue: https://github.com/genenetwork/gn-gemtext-threads/blob/main/topics/gn1-migration-to-gn2/clustering.gmi * gn3/computations/heatmap.py: Fix ordering function * tests/unit/computations/test_heatmap.py: update test The order of the traits is important for the clustering algorithm, since the clustering seems to use the distance of one trait from another to determine how to order them. This commit also gets rid of the xoffset argument that is not important to the ordering, and was used in the older GN1 to determine how to draw the clustering lines.
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