diff options
author | Frederick Muriuki Muriithi | 2021-09-17 11:20:16 +0300 |
---|---|---|
committer | Frederick Muriuki Muriithi | 2021-09-17 11:20:16 +0300 |
commit | 1e2357049adc72808fbf8eaac3da9411d3c78c66 (patch) | |
tree | 778d22e2f021fddf6dfbd4abc9ec312c4043f22d /gn3/computations/qtlreaper.py | |
parent | 8ac3194f06084dfe5d0cfb141f178d83d937fcc3 (diff) | |
download | genenetwork3-1e2357049adc72808fbf8eaac3da9411d3c78c66.tar.gz |
Fix a number of linting issues
Issue:
https://github.com/genenetwork/gn-gemtext-threads/blob/main/topics/gn1-migration-to-gn2/clustering.gmi
Diffstat (limited to 'gn3/computations/qtlreaper.py')
-rw-r--r-- | gn3/computations/qtlreaper.py | 7 |
1 files changed, 4 insertions, 3 deletions
diff --git a/gn3/computations/qtlreaper.py b/gn3/computations/qtlreaper.py index 5180853..377db9b 100644 --- a/gn3/computations/qtlreaper.py +++ b/gn3/computations/qtlreaper.py @@ -110,9 +110,10 @@ def organise_reaper_main_results(parsed_results): unique_chromosomes = {item["Chr"] for item in id_items} return { "ID": identifier, - "chromosomes": {_chr["Chr"]: _chr for _chr in [ - __organise_by_chromosome(chromo, id_items) - for chromo in sorted( + "chromosomes": { + _chr["Chr"]: _chr for _chr in [ + __organise_by_chromosome(chromo, id_items) + for chromo in sorted( unique_chromosomes, key=chromosome_sorter_key_fn)]}} unique_ids = {res["ID"] for res in parsed_results} |