aboutsummaryrefslogtreecommitdiff
path: root/gn3/computations/heatmap.py
diff options
context:
space:
mode:
authorMuriithi Frederick Muriuki2021-08-30 07:05:49 +0300
committerMuriithi Frederick Muriuki2021-08-30 07:05:49 +0300
commitb95ad3bd2ce8bc22d1dcadefdf76c43f28309984 (patch)
treee80333c34d1de181a8e2fe9a990ca7e6144de790 /gn3/computations/heatmap.py
parent983acfdfc523677b4d7501287a000b7fd52a2c39 (diff)
downloadgenenetwork3-b95ad3bd2ce8bc22d1dcadefdf76c43f28309984.tar.gz
Fix some linting errors and minor bugs.
Diffstat (limited to 'gn3/computations/heatmap.py')
-rw-r--r--gn3/computations/heatmap.py9
1 files changed, 4 insertions, 5 deletions
diff --git a/gn3/computations/heatmap.py b/gn3/computations/heatmap.py
index dcd64b1..e0ff05b 100644
--- a/gn3/computations/heatmap.py
+++ b/gn3/computations/heatmap.py
@@ -157,7 +157,7 @@ def heatmap_data(formd, search_result, conn: Any):
traits_list = tuple(x[0] for x in traits_details)
traits_data_list = [x[1] for x in traits_details]
exported_traits_data_list = tuple(
- export_trait_data(td, strainlist) for x in traits_data_list)
+ export_trait_data(td, strainlist) for td in traits_data_list)
return {
"target_description_checked": formd.formdata.getvalue(
@@ -190,7 +190,6 @@ def compute_heatmap_order(
d_1 = (0, 0, 0) # returned from self.draw in lines 391 and 399. This is just a placeholder
def __order_maker(norder, slnk_dt):
- print("norder:{}, slnk_dt:{}".format(norder, slnk_dt))
if isinstance(slnk_dt[0], int) and isinstance(slnk_dt[1], int):
return norder + (
(xoffset+20, slnk_dt[0]), (xoffset + 40, slnk_dt[1]))
@@ -221,9 +220,9 @@ def retrieve_strains_and_values(orders, strainlist, traits_data_list):
rets = []
for order in orders:
temp_val = traits_data_list[order[1]]
- for i in range(len(strainlist)):
- if temp_val[i] != None:
- strains.append(strainlist[i])
+ for i, strain in enumerate(strainlist):
+ if temp_val[i] is not None:
+ strains.append(strain)
values.append(temp_val[i])
rets.append([order, strains[:], values[:]])
strains = []