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| author | Muriithi Frederick Muriuki | 2021-09-01 06:18:20 +0300 |
|---|---|---|
| committer | Muriithi Frederick Muriuki | 2021-09-01 06:42:51 +0300 |
| commit | 221c773daea839ecf0e50c196484bb91e3a6db33 (patch) | |
| tree | 50e139dd0bbed18e1771fcfcd3dd0195ec78efe7 /gn3/computations/gemma.py | |
| parent | b5e1d1176f1bf4f7c0b68b27beb15e99418f1650 (diff) | |
| download | genenetwork3-221c773daea839ecf0e50c196484bb91e3a6db33.tar.gz | |
Implement parsing of genotype labels
Issue:
https://github.com/genenetwork/gn-gemtext-threads/blob/main/topics/gn1-migration-to-gn2/clustering.gmi
* gn3/db/genotypes.py: parse genotype labels
* tests/unit/db/test_genotypes.py: test that genotype labels are parsed
correctly
As part of parsing the genotype files into usable python data structures,
this commit adds a function to parse the label lines (beginning with "@")
into the appropriate values.
Diffstat (limited to 'gn3/computations/gemma.py')
0 files changed, 0 insertions, 0 deletions