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| author | Muriithi Frederick Muriuki | 2021-07-23 09:18:40 +0300 |
|---|---|---|
| committer | Muriithi Frederick Muriuki | 2021-07-23 09:18:40 +0300 |
| commit | 278f1a18b59b1cadd04c50a9af35b5aece4d722d (patch) | |
| tree | 7cf307f6fb0443c644fd051e51d65688c3846cf3 /gn3/computations/__init__.py | |
| parent | 8705e9186051fb5d11d150991c49f6f73056183b (diff) | |
| download | genenetwork3-278f1a18b59b1cadd04c50a9af35b5aece4d722d.tar.gz | |
Add data examples for `slink`. Implement function.
Issue:
https://github.com/genenetwork/gn-gemtext-threads/blob/main/topics/gn1-migration-to-gn2/clustering.gmi
* gn3/computations/slink.py: Copy the function, mostly verbatim from
genenetwork1. See:
https://github.com/genenetwork/genenetwork1/blob/master/web/webqtl/heatmap/slink.py#L107-L138
* tests/unit/computations/test_slink.py: Add a test with some example data to
test that the implementation gives the same results as that in genenetwork1
Diffstat (limited to 'gn3/computations/__init__.py')
0 files changed, 0 insertions, 0 deletions