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authorFrederick Muriuki Muriithi2022-03-11 11:51:02 +0300
committerFrederick Muriuki Muriithi2022-03-11 11:51:02 +0300
commit9691e225724e041997c74f8665dcbfa12bb1c579 (patch)
tree271d99dbf6d72161e343ddf8765f9543fe752e37 /gn3/commands.py
parenta7696cc668e00215e1d5af2425765451811bca9d (diff)
downloadgenenetwork3-9691e225724e041997c74f8665dcbfa12bb1c579.tar.gz
Fix some linting issues
Diffstat (limited to 'gn3/commands.py')
-rw-r--r--gn3/commands.py1
1 files changed, 1 insertions, 0 deletions
diff --git a/gn3/commands.py b/gn3/commands.py
index 0e0b53c..e622068 100644
--- a/gn3/commands.py
+++ b/gn3/commands.py
@@ -54,6 +54,7 @@ def compose_rqtl_cmd(rqtl_wrapper_cmd: str,
def compose_pcorrs_command(
primary_trait: str, control_traits: Tuple[str, ...], method: str,
target_database: str, criteria: int = 500):
+ """Compose the command to run partias correlations"""
rundir = os.path.abspath(".")
return (
f"{sys.executable}", f"{rundir}/scripts/partial_correlations.py",