aboutsummaryrefslogtreecommitdiff
path: root/gn3/api
diff options
context:
space:
mode:
authorAlexander Kabui2021-04-15 02:15:39 +0300
committerAlexander Kabui2021-04-15 02:15:39 +0300
commitff80b5228e741c24d66d1d1c13702a34aac77a78 (patch)
treeba6b0b8590f949d134c5d21abcc28c287fff5e6f /gn3/api
parent941ac598f7c15161c4e8da2f1f279bb6b6f73d80 (diff)
downloadgenenetwork3-ff80b5228e741c24d66d1d1c13702a34aac77a78.tar.gz
test endpoint for fetching probeset data types
Diffstat (limited to 'gn3/api')
-rw-r--r--gn3/api/datasets.py20
1 files changed, 20 insertions, 0 deletions
diff --git a/gn3/api/datasets.py b/gn3/api/datasets.py
index 3d6518e..2d13120 100644
--- a/gn3/api/datasets.py
+++ b/gn3/api/datasets.py
@@ -4,6 +4,8 @@ from flask import jsonify
from gn3.computations.datasets import create_dataset
from gn3.computations.datasets import get_traits_data
+from gn3.computations.datasets import get_probeset_trait_data
+
from gn3.db_utils import database_connector
@@ -42,3 +44,21 @@ def fetch_traits_data(dataset_name, dataset_type):
conn.close()
return jsonify({"results": results})
+
+
+@dataset.route("/fetch_probeset_data/<dataset_name>")
+def fetch_probeset_data(dataset_name):
+ """Endpoint for fetching probeset trait data"""
+ trait_sample_ids = [4, 5, 6, 7, 8, 9, 10, 11, 12, 14, 15,
+ 17, 18, 19, 20, 21, 22, 24, 25, 26, 28, 29, 30, 31,
+ 35, 36, 37, 39, 98, 99, 100, 103, 487, 105, 106, 110, 115,
+ 116, 117, 118, 119, 120, 919, 147,
+ 121, 40, 41, 124, 125, 128, 135, 129, 130, 131,
+ 132, 134, 138, 139, 140, 141, 142, 144,
+ 145, 148, 149, 920, 922, 2, 3, 1, 1100]
+
+ conn, _cursor = database_connector()
+
+ results = get_probeset_trait_data(trait_sample_ids, conn, dataset_name)
+
+ return jsonify({"results": results})