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author | Alexander Kabui | 2021-09-27 16:09:46 +0300 |
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committer | Alexander Kabui | 2021-09-27 16:09:46 +0300 |
commit | 62054d914efb4322fba311f968cb27b662aa6806 (patch) | |
tree | f904231c44d87db36e9b794f57373daf6508a11c /gn3/api | |
parent | 6f25b8e2b1d1a34c054d325b1c37b303529b8827 (diff) | |
parent | 0cbb6ecde0315b7d6f021cb17406f5e5197e8a05 (diff) | |
download | genenetwork3-62054d914efb4322fba311f968cb27b662aa6806.tar.gz |
fix merge conflicts
Diffstat (limited to 'gn3/api')
-rw-r--r-- | gn3/api/heatmaps.py | 36 |
1 files changed, 36 insertions, 0 deletions
diff --git a/gn3/api/heatmaps.py b/gn3/api/heatmaps.py new file mode 100644 index 0000000..62ca2ad --- /dev/null +++ b/gn3/api/heatmaps.py @@ -0,0 +1,36 @@ +""" +Module to hold the entrypoint functions that generate heatmaps +""" + +import io +from flask import jsonify +from flask import request +from flask import Blueprint +from gn3.heatmaps import build_heatmap +from gn3.db_utils import database_connector + +heatmaps = Blueprint("heatmaps", __name__) + +@heatmaps.route("/clustered", methods=("POST",)) +def clustered_heatmaps(): + """ + Parses the incoming data and responds with the JSON-serialized plotly figure + representing the clustered heatmap. + """ + traits_names = request.get_json().get("traits_names", tuple()) + if len(traits_names) < 2: + return jsonify({ + "message": "You need to provide at least two trait names." + }), 400 + conn, _cursor = database_connector() + def parse_trait_fullname(trait): + name_parts = trait.split(":") + return "{dataset_name}::{trait_name}".format( + dataset_name=name_parts[1], trait_name=name_parts[0]) + traits_fullnames = [parse_trait_fullname(trait) for trait in traits_names] + + with io.StringIO() as io_str: + _filename, figure = build_heatmap(traits_fullnames, conn) + figure.write_json(io_str) + fig_json = io_str.getvalue() + return fig_json, 200 |