initial commit for creating dataset

1 files changed, 48 insertions, 0 deletions

diff --git a/gn3/api/traits.py b/gn3/api/traits.py
new file mode 100644
index 0000000..b3ddcc0
--- /dev/null
+++ b/gn3/api/traits.py
@@ -0,0 +1,48 @@
+"""this module contains the all endpoints for traits"""
+from unittest import mock
+
+from flask import Blueprint
+from flask import jsonify
+from flask import request
+
+from gn3.computations.traits import fetch_trait
+from gn3.computations.traits import get_trait_info_data
+trait = Blueprint("trait", __name__)
+
+
+@trait.route("/")
+def home():
+    """initial endpoint for traits"""
+    return jsonify({"results": "success"})
+
+
+@trait.route("/<string:trait_name>/<string:dataset_name>")
+def create_trait(trait_name, dataset_name):
+    """endpoints for creating trait first should\
+    call the endpoint for creating the trait only\
+    trait  data is the  sample data"""
+
+    trait_dataset = mock.Mock()  # xtodo should replace this with calling epoints
+    trait_dataset.name = dataset_name
+
+    trait_results = fetch_trait(dataset=trait_dataset, trait_name=trait_name)
+
+    return jsonify(trait_results)
+
+
+@trait.route("/trait_info/<string:trait_name>", methods=["POST"])
+def fetch_trait_info(trait_name):
+    """api endpoint for fetching the trait info \
+    expects the trait and trait dataset to have\
+    been created """
+    data = request.get_json()
+
+    trait_dataset = data["trait_dataset"]
+    trait_data = data["trait"]
+    _trait_name = trait_name  # should be used as key to return results
+
+    database_instance = mock.Mock()
+
+    results = get_trait_info_data(trait_dataset, trait_data, database_instance)
+
+    return jsonify(results)