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author | Munyoki Kilyungi | 2022-12-01 15:32:42 +0300 |
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committer | BonfaceKilz | 2022-12-06 11:28:28 +0300 |
commit | c75ed75c6a5987eed6672be924870f86282ed6d6 (patch) | |
tree | 9d91afcbef1ea9c2ec6557b86b5187f5093374ab /gn3/api/metadata.py | |
parent | 09f4d9c4bec6e3395296a69ce718dea30240ed54 (diff) | |
download | genenetwork3-c75ed75c6a5987eed6672be924870f86282ed6d6.tar.gz |
Use a dataset's name to fetch it's metadata from RDF
* gn3/api/metadata.py (jsonify_dataset_metadata): Rewrite metadata
end-point to use a dataset's name instead of it's accession_id.
* gn3/db/rdf.py (get_dataset_metadata): Replace accession_id with
name. Use one single RDF query instead of multiple queries.
Diffstat (limited to 'gn3/api/metadata.py')
-rw-r--r-- | gn3/api/metadata.py | 6 |
1 files changed, 3 insertions, 3 deletions
diff --git a/gn3/api/metadata.py b/gn3/api/metadata.py index 35e4067..8f6127f 100644 --- a/gn3/api/metadata.py +++ b/gn3/api/metadata.py @@ -13,14 +13,14 @@ from gn3.db.rdf import get_dataset_metadata metadata = Blueprint("metadata", __name__) -@metadata.route("/dataset/<accession_id>", methods=["GET"]) -def jsonify_dataset_metadata(accession_id): +@metadata.route("/dataset/<name>", methods=["GET"]) +def jsonify_dataset_metadata(name): """Fetch a dataset's metadata given it's ACCESSION_ID""" try: return jsonify( get_dataset_metadata( SPARQLWrapper(current_app.config.get("SPARQL_ENDPOINT")), - accession_id, + name, ).data ) # The virtuoso server is misconfigured or it isn't running at all |