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authorFrederick Muriuki Muriithi2021-10-06 11:25:38 +0300
committerBonfaceKilz2021-10-19 10:12:51 +0300
commit7627378dd1eb52055f4e25047ba53a2d2e4c092f (patch)
tree794ccb3306271d335fa78123a818732eb224c865 /gn3/api/heatmaps.py
parentaeefaad0629ca29e81ac3f0dbe882d7bf09b8711 (diff)
downloadgenenetwork3-7627378dd1eb52055f4e25047ba53a2d2e4c092f.tar.gz
Enable vertical and horizontal heatmaps
Issue: https://github.com/genenetwork/gn-gemtext-threads/blob/main/topics/gn1-migration-to-gn2/non-clustered-heatmaps-and-flipping.gmi * Update the request endpoint, so that it produces a vertical or horizontal heatmap depending on the user's request.
Diffstat (limited to 'gn3/api/heatmaps.py')
-rw-r--r--gn3/api/heatmaps.py6
1 files changed, 4 insertions, 2 deletions
diff --git a/gn3/api/heatmaps.py b/gn3/api/heatmaps.py
index 62ca2ad..633a061 100644
--- a/gn3/api/heatmaps.py
+++ b/gn3/api/heatmaps.py
@@ -17,7 +17,9 @@ def clustered_heatmaps():
Parses the incoming data and responds with the JSON-serialized plotly figure
representing the clustered heatmap.
"""
- traits_names = request.get_json().get("traits_names", tuple())
+ heatmap_request = request.get_json()
+ traits_names = heatmap_request.get("traits_names", tuple())
+ vertical = heatmap_request.get("vertical", False)
if len(traits_names) < 2:
return jsonify({
"message": "You need to provide at least two trait names."
@@ -30,7 +32,7 @@ def clustered_heatmaps():
traits_fullnames = [parse_trait_fullname(trait) for trait in traits_names]
with io.StringIO() as io_str:
- _filename, figure = build_heatmap(traits_fullnames, conn)
+ figure = build_heatmap(traits_fullnames, conn, vertical=vertical)
figure.write_json(io_str)
fig_json = io_str.getvalue()
return fig_json, 200