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author | Frederick Muriuki Muriithi | 2022-11-13 04:11:30 +0300 |
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committer | Frederick Muriuki Muriithi | 2022-11-13 04:11:30 +0300 |
commit | 0bdc5bc67015d964bad839df12cd57c8b288e30d (patch) | |
tree | 26cbb291b52878830801d3d130cb1f0cc3ba3b6d /README.md | |
parent | 3bc52c3c6fb86f599f1f086fb62009a0af562f41 (diff) | |
download | genenetwork3-0bdc5bc67015d964bad839df12cd57c8b288e30d.tar.gz |
Documentation: Explain how to run migrations
* .gitignore: ignore all yoyo configuration files
* README.md: Update documentation
* yoyo.auth.ini: stop tracking the yoyo configuration file.
Diffstat (limited to 'README.md')
-rw-r--r-- | README.md | 48 |
1 files changed, 42 insertions, 6 deletions
@@ -103,27 +103,63 @@ See also instructions in [.guix.scm](.guix.scm). The migration scripts for the authentication and authorisation system are in the *migrations/auth* folder in the root of the repository. -To create an new migration, do: +To create an new migration script for the, do: ```bash -$ yoyo new --config=yoyo.auth.ini -m "<description of the migration>" +$ yoyo new -m "<description of the migration>" ./migrations/auth/ ``` -That initialises an new migration script under the *migrations/auth* folder and gives it a name derived from the date, the sequence for that day, and the provided description. - -e.g. +The command will ask whether you want to save the migration configuration, e.g. ```bash $ yoyo new --config=yoyo.auth.ini -m "testing a new migration" Error: could not open editor! Created file ./migrations/auth/20221103_02_HBzwk-testing-a-new-migration.py +Save migration configuration to yoyo.ini? +This is saved in plain text and contains your database password. + +Answering 'y' means you do not have to specify the migration source or database connection for future runs [yn]: ``` +If you specify `y` then a file named yoyo.ini will be created in your current working directory, and you can refer to it to avoid providing the `./migrations/auth` explicitly. + Now you can open and edit the scripts to provide the appropriate SQL statements to update or rollback your schema. ### Running the Migrations -**TODO**: Document how to run the migrations +To apply the migrations, you can do something like: + +```bash +$ yoyo apply --database="sqlite:////tmp/test-auth.db" ./migrations/auth/ + +[20221103_01_js9ub-initialise-the-auth-entic-oris-ation-database] +Shall I apply this migration? [Ynvdaqjk?]: Y + +[20221103_02_sGrIs-create-user-credentials-table] +Shall I apply this migration? [Ynvdaqjk?]: Y + +[20221108_01_CoxYh-create-the-groups-table] +Shall I apply this migration? [Ynvdaqjk?]: Y + +[20221108_02_wxTr9-create-privileges-table] +Shall I apply this migration? [Ynvdaqjk?]: Y + +... +``` + +If you have previously initialised the yoyo config file, you can put the database uri in the configuration file and just provide it to avoid the prompt to save the configuration. + +As a convenience, and to enable the CI/CD to apply the migrations automatically, I have provided a flask cli command that can be run with: + +```bash +$ export FLASK_APP=main.py +$ flask apply-migrations +``` + +This expects that the following two configuration variables are set in the application: + +* `AUTH_MIGRATIONS`: path to the migration scripts +* `AUTH_DB`: path to the sqlite database file (will be created if absent) ## Running Tests |