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authorFrederick Muriuki Muriithi2021-11-12 04:07:42 +0300
committerFrederick Muriuki Muriithi2021-11-12 04:07:42 +0300
commitd1617bd8af25bf7c7777be7a634559fd31b491ad (patch)
tree9565d4fcca4fa553dc21a9543353a8b29357ab4a /README.md
parentd895eea22ab908c11f4ebb77f99518367879b1f6 (diff)
parent85405fe6875358d3bb98b03621271d5909dd393f (diff)
downloadgenenetwork3-d1617bd8af25bf7c7777be7a634559fd31b491ad.tar.gz
Merge branch 'main' of github.com:genenetwork/genenetwork3 into partial-correlations
Diffstat (limited to 'README.md')
-rw-r--r--README.md6
1 files changed, 3 insertions, 3 deletions
diff --git a/README.md b/README.md
index 84a7a54..84e5fb9 100644
--- a/README.md
+++ b/README.md
@@ -24,7 +24,7 @@ guix environment --load=guix.scm
Also, make sure you have the [guix-bioinformatics](https://git.genenetwork.org/guix-bioinformatics/guix-bioinformatics) channel set up.
```bash
-env GUIX_PACKAGE_PATH=~/guix-bioinformatics/ ~/.config/guix/current/bin/guix environment --expose=$HOME/genotype_files/ --load=guix.scm
+guix environment --expose=$HOME/genotype_files/ --load=guix.scm
python3
import redis
```
@@ -32,7 +32,7 @@ python3
#### Run a Guix container
```
-env GUIX_PACKAGE_PATH=~/guix-bioinformatics/ ~/.config/guix/current/bin/guix environment -C --network --expose=$HOME/genotype_files/ --load=guix.scm
+guix environment -C --network --expose=$HOME/genotype_files/ --load=guix.scm
```
@@ -41,7 +41,7 @@ env GUIX_PACKAGE_PATH=~/guix-bioinformatics/ ~/.config/guix/current/bin/guix env
Create a new profile with
```
-env GUIX_PACKAGE_PATH=~/guix-bioinformatics/ ~/.config/guix/current/bin/guix package -i genenetwork3 -p ~/opt/genenetwork3
+guix package -i genenetwork3 -p ~/opt/genenetwork3
```
and load the profile settings with