diff options
| author | Alexander_Kabui | 2025-03-27 14:21:38 +0300 |
|---|---|---|
| committer | Alexander_Kabui | 2025-03-27 14:21:38 +0300 |
| commit | 9127ae139184839b12bbc7aaadc94f345759c167 (patch) | |
| tree | 117de8acb2d66ea76109ebe86be565b18249702d | |
| parent | b13447ff27581b2018e374e1d672dd680f06f177 (diff) | |
| download | genenetwork3-9127ae139184839b12bbc7aaadc94f345759c167.tar.gz | |
feat: Check for founder and covar file in rqtl2 metadata.
| -rw-r--r-- | gn3/computations/rqtl2.py | 2 |
1 files changed, 2 insertions, 0 deletions
diff --git a/gn3/computations/rqtl2.py b/gn3/computations/rqtl2.py index 3676194..5d5f68e 100644 --- a/gn3/computations/rqtl2.py +++ b/gn3/computations/rqtl2.py @@ -18,6 +18,8 @@ def generate_rqtl2_files(data, workspace_dir): "geno_map_file": "geno_map_data", "physical_map_file": "physical_map_data", "phenocovar_file": "phenocovar_data", + "founder_geno_file" : "founder_geno_data", + "covar_file" : "covar_data" } parsed_files = {} for file_name, data_key in file_to_name_map.items(): |