Apply yapf file formatting to file

2 files changed, 30 insertions, 26 deletions

diff --git a/gn3/commands.py b/gn3/commands.py
index 7287348..219f4fd 100644
--- a/gn3/commands.py
+++ b/gn3/commands.py
@@ -12,29 +12,29 @@ from redis.client import Redis  # Used only in type hinting
 from gn3.exceptions import RedisConnectionError
 
 
-def compose_gemma_cmd(
-        gemma_wrapper_cmd: str = "gemma-wrapper",
-        gemma_wrapper_kwargs: Optional[Dict] = None,
-        gemma_kwargs: Optional[Dict] = None,
-        gemma_args: Optional[List] = None) -> str:
+def compose_gemma_cmd(gemma_wrapper_cmd: str = "gemma-wrapper",
+                      gemma_wrapper_kwargs: Optional[Dict] = None,
+                      gemma_kwargs: Optional[Dict] = None,
+                      gemma_args: Optional[List] = None) -> str:
     """Compose a valid GEMMA command given the correct values"""
     cmd = f"{gemma_wrapper_cmd} --json"
     if gemma_wrapper_kwargs:
         cmd += " "  # Add extra space between commands
-        cmd += " ".join([f"--{key} {val}" for key, val
-                         in gemma_wrapper_kwargs.items()])
+        cmd += " ".join(
+            [f"--{key} {val}" for key, val in gemma_wrapper_kwargs.items()])
     cmd += " -- "
     if gemma_kwargs:
-        cmd += " ".join([f"-{key} {val}"
-                         for key, val in gemma_kwargs.items()])
+        cmd += " ".join([f"-{key} {val}" for key, val in gemma_kwargs.items()])
     if gemma_args:
         cmd += " "
         cmd += " ".join([f"{arg}" for arg in gemma_args])
     return cmd
 
 
-def queue_cmd(conn: Redis, job_queue: str,
-              cmd: str, email: Optional[str] = None) -> str:
+def queue_cmd(conn: Redis,
+              job_queue: str,
+              cmd: str,
+              email: Optional[str] = None) -> str:
     """Given a command CMD; (optional) EMAIL; and a redis connection CONN, queue
 it in Redis with an initial status of 'queued'.  The following status codes
 are supported:
diff --git a/tests/unit/test_file_utils.py b/tests/unit/test_file_utils.py
index b319693..a0f83ee 100644
--- a/tests/unit/test_file_utils.py
+++ b/tests/unit/test_file_utils.py
@@ -27,20 +27,22 @@ class TestFileUtils(unittest.TestCase):
 
     def test_get_dir_hash_non_existent_dir(self):
         """Test thata an error is raised when the dir does not exist"""
-        self.assertRaises(FileNotFoundError, get_dir_hash,
+        self.assertRaises(FileNotFoundError,
+                          get_dir_hash,
                           "/non-existent-file")
 
     def test_jsonfile_to_dict(self):
-        """Test that a json file is parsed correctly""" ""
-        json_file = os.path.join(os.path.dirname(__file__), "test_data",
-                                 "metadata.json")
+        """Test that a json file is parsed correctly"""""
+        json_file = os.path.join(os.path.dirname(__file__),
+                                 "test_data", "metadata.json")
         self.assertEqual("Longer description",
                          jsonfile_to_dict(json_file).get("description"))
 
     def test_jsonfile_to_dict_nonexistent_file(self):
         """Test that a ValueError is raised when the json file is
 non-existent"""
-        self.assertRaises(FileNotFoundError, jsonfile_to_dict,
+        self.assertRaises(FileNotFoundError,
+                          jsonfile_to_dict,
                           "/non-existent-dir")
 
     @mock.patch("gn3.file_utils.tarfile")
@@ -51,8 +53,7 @@ non-existent"""
         mock_fileobj = MockFile(save=mock.MagicMock(),
                                 filename="upload-data.tar.gz")
         mock_tarfile.return_value = mock.Mock()
-        result = extract_uploaded_file(mock_fileobj,
-                                       "/tmp",
+        result = extract_uploaded_file(mock_fileobj, "/tmp",
                                        token="abcdef-abcdef")
         mock_fileobj.save.assert_called_once_with("/tmp/abcdef-abcdef/"
                                                   "upload-data.tar.gz")
@@ -61,17 +62,20 @@ non-existent"""
         mock_tarfile.open.return_value.extractall.assert_called_once_with(
             path='/tmp/abcdef-abcdef')
         mock_file.assert_called_once_with("upload-data.tar.gz")
-        self.assertEqual(result, {"status": 0, "token": "abcdef-abcdef"})
+        self.assertEqual(result,
+                         {"status": 0,
+                          "token": "abcdef-abcdef"})
 
     @mock.patch("gn3.file_utils.secure_filename")
     def test_extract_uploaded_file_non_existent_gzip(self, mock_file):
         """Test that the right error message is returned when there is a problem
 extracting the file"""
-        mock_file.return_value = os.path.join(os.path.dirname(__file__),
-                                              "CTtyodSTh5")  # Does not exist!
-        mock_fileobj = MockFile(save=mock.MagicMock(), filename="")
+        mock_file.return_value = os.path.join(
+            os.path.dirname(__file__),
+            "CTtyodSTh5")  # Does not exist!
+        mock_fileobj = MockFile(save=mock.MagicMock(),
+                                filename="")
         result = extract_uploaded_file(mock_fileobj, "/tmp")
-        self.assertEqual(result, {
-            "status": 128,
-            "error": "gzip failed to unpack file"
-        })
+        self.assertEqual(result,
+                         {"status": 128,
+                          "error": "gzip failed to unpack file"})