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authorArun Isaac2021-11-16 12:44:22 +0530
committerArun Isaac2021-11-16 12:44:22 +0530
commit8c72fa0cfdccb55e22b98b5f242f07d530e7c573 (patch)
tree4ff016d057cef628ea235614c86ab86c4df2bf0a
parentf566d9eb1d4e12d7e7a6ef319c39760f5726578e (diff)
downloadgenenetwork3-8c72fa0cfdccb55e22b98b5f242f07d530e7c573.tar.gz
Remove sqlalchemy.
* gn3/settings.py (SQLALCHEMY_TRACK_MODIFICATIONS): Delete variable. * guix.scm (genenetwork3)[propagated-inputs]: Remove python-sqlalchemy-stubs. * setup.py: Remove sqlalchemy-stubs from install_requires.
-rw-r--r--gn3/settings.py1
-rw-r--r--guix.scm2
-rw-r--r--setup.py1
3 files changed, 0 insertions, 4 deletions
diff --git a/gn3/settings.py b/gn3/settings.py
index 57c63df..0a6d03b 100644
--- a/gn3/settings.py
+++ b/gn3/settings.py
@@ -17,7 +17,6 @@ RQTL_WRAPPER = "rqtl_wrapper.R"
SQL_URI = os.environ.get(
"SQL_URI", "mysql://webqtlout:webqtlout@localhost/db_webqtl")
SECRET_KEY = "password"
-SQLALCHEMY_TRACK_MODIFICATIONS = False
# gn2 results only used in fetching dataset info
GN2_BASE_URL = "http://www.genenetwork.org/"
diff --git a/guix.scm b/guix.scm
index a48b05a..faf353f 100644
--- a/guix.scm
+++ b/guix.scm
@@ -79,8 +79,6 @@
("python-requests" ,python-requests)
("python-scipy" ,python-scipy)
("python-flask-socketio" ,python-flask-socketio)
- ("python-sqlalchemy-stubs"
- ,python-sqlalchemy-stubs)
("r-optparse" ,r-optparse)
("r-qtl" ,r-qtl)
("r-stringi" ,r-stringi)
diff --git a/setup.py b/setup.py
index 98a076f..55b4be2 100644
--- a/setup.py
+++ b/setup.py
@@ -19,7 +19,6 @@ setup(author='Bonface M. K.',
"redis==3.5.3"
"requests==2.25.1"
"scipy==1.6.0"
- "sqlalchemy-stubs==0.4"
"plotly==4.14.3"
"flask-cors==3.0.9"
],