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| author | zsloan | 2021-09-03 15:38:43 +0000 |
|---|---|---|
| committer | zsloan | 2021-09-03 15:38:43 +0000 |
| commit | 00be7692a53f0199247a994a6494481f57142a9a (patch) | |
| tree | 838ed65c139d449a24e69a79a443a31f19c790f1 | |
| parent | 79d19f4ce5cdce7f78128e8d7321dfa701e1d04b (diff) | |
| download | genenetwork3-00be7692a53f0199247a994a6494481f57142a9a.tar.gz | |
Add covarstruct as a possible keyword for the rqtl_wrapper.R script (not integrated into the script yet though)
| -rw-r--r-- | gn3/api/rqtl.py | 2 |
1 files changed, 1 insertions, 1 deletions
diff --git a/gn3/api/rqtl.py b/gn3/api/rqtl.py index ebb746c..b5627c5 100644 --- a/gn3/api/rqtl.py +++ b/gn3/api/rqtl.py @@ -24,7 +24,7 @@ run the rqtl_wrapper script and return the results as JSON raise FileNotFoundError # Split kwargs by those with values and boolean ones that just convert to True/False - kwargs = ["model", "method", "nperm", "scale", "control_marker"] + kwargs = ["covarstruct", "model", "method", "nperm", "scale", "control_marker"] boolean_kwargs = ["addcovar", "interval", "pstrata"] all_kwargs = kwargs + boolean_kwargs |