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| author | Frederick Muriuki Muriithi | 2021-12-10 11:24:33 +0300 |
|---|---|---|
| committer | Frederick Muriuki Muriithi | 2021-12-10 11:24:33 +0300 |
| commit | a47a1c57c5a7bfd7ca10957e2225568e565467af (patch) | |
| tree | 77ded89eea7cbf1f1bd352796763ee0b2db905d0 | |
| parent | 7743715771b6149606504a011e6f0aeb93a94488 (diff) | |
| download | genenetwork3-a47a1c57c5a7bfd7ca10957e2225568e565467af.tar.gz | |
Fix parameters
Issue:
https://github.com/genenetwork/gn-gemtext-threads/blob/main/topics/gn1-migration-to-gn2/partial-correlations.gmi
* Provide parameters as a dict of items (which works for MySQL), rather than
as keywork arguments (as works in PostgreSQL).
| -rw-r--r-- | gn3/db/correlations.py | 6 |
1 files changed, 4 insertions, 2 deletions
diff --git a/gn3/db/correlations.py b/gn3/db/correlations.py index 3d12019..254af10 100644 --- a/gn3/db/correlations.py +++ b/gn3/db/correlations.py @@ -235,8 +235,10 @@ def fetch_tissue_probeset_xref_info( "INNER JOIN TissueProbeSetXRef AS t ON t.Symbol = x.Symbol " "AND t.Mean = x.maxmean") cursor.execute( - query, probeset_freeze_id=probeset_freeze_id, - symbols=tuple(gene_name_list)) + query, { + "probeset_freeze_id": probeset_freeze_id, + "symbols": tuple(gene_name_list) + }) results = cursor.fetchall() |