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authorBonfaceKilz2021-08-03 15:26:18 +0300
committerBonfaceKilz2021-08-03 15:26:18 +0300
commit32cfe15f056c0c2958d7da79d7a25e585d9cc13a (patch)
tree0dfc4c01f2fb913fd70a43c88b5cfb019bdb3f50
parentc3fe5b77b4977c7ffe142852879fa1af9a32a929 (diff)
downloadgenenetwork3-32cfe15f056c0c2958d7da79d7a25e585d9cc13a.tar.gz
guix.scm: Add csvdiff as a propagated input
-rw-r--r--guix.scm15
1 files changed, 6 insertions, 9 deletions
diff --git a/guix.scm b/guix.scm
index f20d62a..efef9c1 100644
--- a/guix.scm
+++ b/guix.scm
@@ -31,6 +31,7 @@
  (gnu packages databases)
  (gnu packages statistics)
  (gnu packages bioconductor)
+ (gn packages golang)
  (gnu packages python)
  (gnu packages python-check)
  (gnu packages python-crypto)
@@ -70,8 +71,8 @@
                       #:recursive? #t
                       #:select? git-file?))
   (propagated-inputs `(("coreutils" ,coreutils)
-                       ("diffutils" ,diffutils)
                        ("gemma-wrapper" ,gemma-wrapper)
+                       ("csvdiff" ,go-github-com-aswinkarthik-csvdiff)
                        ("python" ,python-wrapper)
                        ("python-bcrypt" ,python-bcrypt)
                        ("python-flask" ,python-flask)
@@ -84,15 +85,11 @@
                        ("python-redis" ,python-redis)
                        ("python-requests" ,python-requests)
                        ("python-scipy" ,python-scipy)
-                       ("python-sqlalchemy-stubs" ,python-sqlalchemy-stubs)
-                       ("r" ,r)
-                       ("r-qtl" ,r-qtl)
+                       ("python-sqlalchemy-stubs"
+                        ,python-sqlalchemy-stubs)
                        ("r-optparse" ,r-optparse)
-                       ("r-stringi" ,r-stringi)
-                       ("r-stringr" ,r-stringr)
-                       ("r-testthat" ,r-testthat)
-                       ("r-wgcna" ,r-wgcna)
-                       ))
+                       ("r-qtl" ,r-qtl)
+                       ("r-stringi" ,r-stringi)))
   (build-system python-build-system)
   (home-page "https://github.com/genenetwork/genenetwork3")
   (synopsis "GeneNetwork3 API for data science and machine learning.")