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BranchCommit messageAuthorAge
auth/implement-authorization-code-flowauth: Implement "Authorization Code Flow"Frederick Muriuki Muriithi23 months
data-access-levels-endpointauth: Unlink data from resourcesFrederick Muriuki Muriithi2 years
feature/autocomplete-generationinit commitAlexander_Kabui23 months
feature/lmdb-rustadd lmdb rust caller functionAlexander_Kabui21 months
gn-guileAdded commentPjotr Prins20 months
lunaRunning luna in containerGN3 production2 years
mainAdd rdf-tests after the check phase.Munyoki Kilyungi6 months
migrate-to-python3.10Fix linting errors caused by bump to Python 3.10Frederick Muriuki Muriithi21 months
oauth2_auth_flowauth: implement OAuth2 flow.Frederick Muriuki Muriithi2 years
rework-genotype-linkingRework genenetwork linkingFrederick Muriuki Muriithi22 months
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AgeCommit messageAuthor
2022-10-05remove data preprocessing for tissue databugfix/remove-pre-data-parsingAlexander_Kabui
2022-09-30Add escape char to avoid error notice.Frederick Muriuki Muriithi
2022-09-29Use the built-in csv module for file output•••Use the built-in csv module for file output in order to avoid subtle errors in the formats. Frederick Muriuki Muriithi
2022-09-06Update link to continuous deployment.•••* README.md: Update link to continuous deployment. Arun Isaac
2022-08-30Update test: include port in parsed data from mysql uriFrederick Muriuki Muriithi
2022-08-25revert for commit 6db3b2af8fc09999996d3acc09890a06f179c669;BugAlexander_Kabui
2022-08-23Remove conn.commit() and conn.rollback()•••* gn3/db/__init__.py (update): Delete conn.commit() and conn.rollback() (insert): Ditto. * gn3/db/case_attributes.py (insert_case_attribute_audit): Ditto. (reject_case_attribute): Ditto. (approve_case_attribute): Ditto. * gn3/db/sample_data.py (update_sample_data): Ditto. (delete_sample_data): Ditto. (insert_sample_data): Ditto. Munyoki Kilyungi
2022-08-22Use non-default MySQL port if present•••By default, MySQL/Mariadb connects at port 3306, however, the configuration variable `SQL_URI` could contain a different port. In that case, this commit allows the system to connect to the non-default port. Frederick Muriuki Muriithi
2022-08-12Add mandatory/expected fields to parsed data.Frederick Muriuki Muriithi
2022-08-10Fix returned value for 'parse_correlation_output'•••* Always return dict * Fix internal '__parse_line__' to always have a valid return Frederick Muriuki Muriithi
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