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# Copyright (C) University of Tennessee Health Science Center, Memphis, TN.
#
# This program is free software: you can redistribute it and/or modify it
# under the terms of the GNU Affero General Public License
# as published by the Free Software Foundation, either version 3 of the
# License, or (at your option) any later version.
#
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
# See the GNU Affero General Public License for more details.
#
# This program is available from Source Forge: at GeneNetwork Project
# (sourceforge.net/projects/genenetwork/).
#
# Contact Drs. Robert W. Williams and Xiaodong Zhou (2010)
# at rwilliams@uthsc.edu and xzhou15@uthsc.edu
#
#
#
# This module is used by GeneNetwork project (www.genenetwork.org)
#
# Created by GeneNetwork Core Team 2010/08/10
#
# Last updated by GeneNetwork Core Team 2010/10/20
print("Mr. Mojo Risin 2")
class webqtlCaseData(object):
"""one case data in one trait
"""
def __init__(self, name, value=None, variance=None, num_cases=None):
self.name = name
self.value = value # Trait Value
self.variance = variance # Trait Variance
self.num_cases = num_cases # Number of individuals/cases
self.this_id = None # Set a sane default (can't be just "id" cause that's a reserved word)
def __repr__(self):
str = ""
if self.value != None:
str += "value=%2.3f" % self.value
if self.variance != None:
str += " variance=%2.3f" % self.variance
if self.num_cases != None:
str += " ndata=%d" % self.num_cases
return str
@property
def display_value(self):
if self.value:
return "%2.3f" % self.value
else:
return "x"
@property
def display_variance(self):
if self.variance:
return "%2.3f" % self.variance
else:
return "x"
#try:
# traitVar = thisvar
# dispVar = "%2.3f" % thisvar
#except:
# traitVar = ''
# dispVar = 'x'
#try:
# traitVal = thisval
# dispVal = "%2.3f" % thisval
#except:
# traitVal = ''
# dispVal = 'x'
#def this_val_full(self):
# strain_name =
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