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path: root/webtests/correlation_matrix_test.py
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"""

Test Correlation matrix

>>> test = Test()
>>> test.get("http://genenetwork.org/")
title: GeneNetwork

Choose the type
>>> test.click_option('''//*[@id="tissue"]''', 'Hippocampus mRNA')

Enter the Get Any
>>> test.enter_text('''//*[@id="tfor"]''', 'grin2b')
text: grin2b

Search
>>> test.click('//*[@id="btsearch"]')

Select the first 4 records
>>> test.click('''/html/body/table/tbody/tr[3]/td/table/tbody/tr/td/form/p/table/tbody/tr[3]/td/div/table/tbody/tr[2]/td/input''')
>>> test.click('''/html/body/table/tbody/tr[3]/td/table/tbody/tr/td/form/p/table/tbody/tr[3]/td/div/table/tbody/tr[3]/td/input''')
>>> test.click('''/html/body/table/tbody/tr[3]/td/table/tbody/tr/td/form/p/table/tbody/tr[3]/td/div/table/tbody/tr[4]/td/input''')
>>> test.click('''/html/body/table/tbody/tr[3]/td/table/tbody/tr/td/form/p/table/tbody/tr[3]/td/div/table/tbody/tr[5]/td/input''')

>>> sleep(5)

Add to collection page
>>> test.click('''/html/body/table/tbody/tr[3]/td/table/tbody/tr/td/form/p/table/tbody/tr[1]/td/table/tbody/tr[1]/td[4]/a''')

>>> sleep(5)

A new window is created, so we switch to it
>>> test.switch_window()
title: BXD Trait Collection

Select all records
>>> test.click('''/html/body/table/tbody/tr[3]/td/table/tbody/tr/td/form/table/tbody/tr/td/table/tbody/tr/td/table/tbody/tr/td/a/img''')


Click Matrix
>>> test.click('''/html/body/table/tbody/tr[3]/td/table/tbody/tr/td/form/table/tbody/tr/td/table/tbody/tr[2]/td/table/tbody/tr/td[2]/a/img''')

Another new window
>>> test.switch_window()
title: Correlation Matrix

Sleep a bunch because this can take a while
>>> sleep(10)

Ensure that the correlation between Trait3 (HC_M2_0606_P::1457003_at) and Trait4 (HC_M2_0606_P::1422223_at) is 0.608
>>> test.get_text('''/html/body/table/tbody/tr[3]/td/table/tbody/tr/td/form/blockquote/table/tbody/tr[5]/td[5]/a/font''')
text: 0.608\n71

"""

from __future__ import print_function, division, absolute_import

from time import sleep

import selenium
from selenium import webdriver
from selenium.common.exceptions import NoSuchElementException, ElementNotVisibleException
from selenium.webdriver.common.keys import Keys

from browser_test import Test
#
#class Test(object):
#    def __init__(self):
#        self.browser = webdriver.Chrome('/home/gn2/gn2/webtests/chromedriver')
#
#    def get(self, url):
#        self.browser.get(url)
#        sleep(5)
#        self.title()
#
#    def click(self, xpath_selector):
#        el = self.browser.find_element_by_xpath(xpath_selector)
#        #text = el.text.strip() or el.get_attribute("value").strip()
#        el.click()
#        #print("clicked:", text)
#        sleep(2)
#
#    def click_option(self, xpath_selector, option_text):
#        el = self.browser.find_element_by_xpath(xpath_selector)
#        for option in el.find_elements_by_tag_name('option'):
#            if option.text == option_text:
#                option.click() # select() in earlier versions of webdriver
#                break
#        sleep(2)
#
#    def enter_text(self, xpath_selector, text):
#        el = self.browser.find_element_by_xpath(xpath_selector)
#        sleep(10)
#        el.send_keys(text)
#        sleep(5)
#        # Just in case things get mangled by JavaScript, etc. we print the text for testing
#        self.get_text(xpath_selector)
#
#    def get_text(self, xpath_selector):
#        el = self.browser.find_element_by_xpath(xpath_selector)
#        text = el.text.strip() or el.get_attribute("value").strip()
#        print("text:", text)
#
#    def switch_window(self):
#        self.browser.switch_to_window(self.browser.window_handles[-1])
#        sleep(2)
#        self.title()
#        sleep(2)
#
#
#    def title(self):
#        print("title:", self.browser.title)
#
#
#
if __name__ == '__main__':
    import doctest
    doctest.testmod()