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# Copyright (C) University of Tennessee Health Science Center, Memphis, TN.
#
# This program is free software: you can redistribute it and/or modify it
# under the terms of the GNU Affero General Public License
# as published by the Free Software Foundation, either version 3 of the
# License, or (at your option) any later version.
#
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
# See the GNU Affero General Public License for more details.
#
# This program is available from Source Forge: at GeneNetwork Project
# (sourceforge.net/projects/genenetwork/).
#
# Contact Drs. Robert W. Williams and Xiaodong Zhou (2010)
# at rwilliams@uthsc.edu and xzhou15@uthsc.edu
#
#
#
# This module is used by GeneNetwork project (www.genenetwork.org)
#
# Created by NL 2011/03/15
#
# Last updated by NL 2011/03/15
import os
from base import webqtlConfig
from base.templatePage import templatePage
from utility import webqtlUtil
#########################################
# SnpBrowser Page
#########################################
class cmdSnpBrowserResultPage(templatePage):
def __init__(self,fd):
templatePage.__init__(self, fd)
filename = self.session("Variant Browser Result", "Computing Variant Browser Results")
webqtlUtil.dump_session(fd, os.path.join(webqtlConfig.TMPDIR, filename +'.session'))
url = webqtlConfig.REFRESHDIR % (webqtlConfig.CGIDIR, self.filename)
os.system("%s %swebqtlCmdLine.py snpbrowser %s >/dev/null 2>&1 &" % (webqtlConfig.PythonPath, webqtlConfig.CMDLINEDIR, filename))
self.redirection = url
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