web/dbdoc/Striatum_Exon_0209.html


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<P class="title">HQF Striatum Exon (Feb09) RMA <A HREF="/webqtl/main.py?FormID=editHtml">
<img src="/images/modify.gif" alt="modify this page" border= 0 valign="middle"></A><BR><BR>Accession number: <A HREF="/webqtl/main.py?FormID=sharinginfo&GN_AccessionId=163">GN163</A></P>

<P>Final and fully corrected Exon 1.0 ST array data. Entered by Arthur Centeno. Data error-checking by Manjunatha N. Jagalur <manju@cs.umass.edu>.  Tissue collected by Glenn Rosen. Array processing by Weikuan Gu.
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<A HREF="http://rosenlab.net/Movie/P14.mov" target="_blank" class="fs14">A movie of the dissection of the brain, including the striatum, by Dr. Glenn Rosen.</p>
<p class="subtitle">About the strains used to generate this set of data</p>
<Blockquote>
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<table width="100%" border="0" cellpadding="5" cellspacing="1">
<tr bgcolor="royalblue"><td><font color=#FFFFFF>Index</font></td><td><font color=#FFFFFF>Array ID</font></td><td><font color=#FFFFFF>Tube No.</font></td><td><font color=#FFFFFF>Tissue</font></td><td><font color=#FFFFFF>Strain</font></td><td><font color=#FFFFFF>Age</font></td><td><font color=#FFFFFF>Sex</font></td></tr>
<tr bgcolor="#eeeeee"><td>1</td><td>R3025SA</td><td>1705</td><td>Striatum</td><td>129S1/SvImJ</td><td>60</td><td>F</td></tr>
<tr bgcolor="#eeeeee"><td>2</td><td>R3026SA</td><td>1375</td><td>Striatum</td><td>129S1/SvImJ</td><td>59</td><td>M</td></tr>
<tr bgcolor="#eeeeee"><td>3</td><td>R3027SA</td><td>1435</td><td>Striatum</td><td>A/J</td><td>59</td><td>F</td></tr>
<tr bgcolor="#eeeeee"><td>4</td><td>R3028SA</td><td>1455</td><td>Striatum</td><td>A/J</td><td>59</td><td>M</td></tr>
<tr bgcolor="#eeeeee"><td>5</td><td>R3029SA</td><td>1395</td><td>Striatum</td><td>AKR/J</td><td>59</td><td>F</td></tr>
<tr bgcolor="#eeeeee"><td>6</td><td>R3030SA</td><td>1415</td><td>Striatum</td><td>AKR/J</td><td>59</td><td>M</td></tr>
<tr bgcolor="#eeeeee"><td>7</td><td>R3031SA</td><td>1227</td><td>Striatum</td><td>B6D2F1</td><td>59</td><td>F</td></tr>
<tr bgcolor="#eeeeee"><td>8</td><td>R3032SA</td><td>1225</td><td>Striatum</td><td>B6D2F1</td><td>59</td><td>M</td></tr>
<tr bgcolor="#eeeeee"><td>9</td><td>R3033SA</td><td>1495</td><td>Striatum</td><td>BALB/cByJ</td><td>59</td><td>F</td></tr>
<tr bgcolor="#eeeeee"><td>10</td><td>R3034SA</td><td>1475</td><td>Striatum</td><td>BALB/cByJ</td><td>59</td><td>M</td></tr>
<tr bgcolor="#eeeeee"><td>11</td><td>R3035SA</td><td>1665</td><td>Striatum</td><td>BTBRT<+>tf/J</td><td>59</td><td>F</td></tr>
<tr bgcolor="#eeeeee"><td>12</td><td>R3036SA</td><td>1615</td><td>Striatum</td><td>BTBRT<+>tf/J</td><td>60</td><td>M</td></tr>
<tr bgcolor="#eeeeee"><td>13</td><td>R3037SA</td><td>457</td><td>Striatum</td><td>BXD1</td><td>59</td><td>F</td></tr>
<tr bgcolor="#eeeeee"><td>14</td><td>R3038SA</td><td>927</td><td>Striatum</td><td>BXD1</td><td>59</td><td>M</td></tr>
<tr bgcolor="#eeeeee"><td>15</td><td>R3055SA</td><td>487</td><td>Striatum</td><td>BXD2</td><td>61</td><td>F</td></tr>
<tr bgcolor="#eeeeee"><td>16</td><td>R3056SA</td><td>477</td><td>Striatum</td><td>BXD2</td><td>61</td><td>M</td></tr>
<tr bgcolor="#eeeeee"><td>17</td><td>R3089SA</td><td>977</td><td>Striatum</td><td>BXD5</td><td>58</td><td>F</td></tr>
<tr bgcolor="#eeeeee"><td>18</td><td>R3090SA</td><td>967</td><td>Striatum</td><td>BXD5</td><td>58</td><td>M</td></tr>
<tr bgcolor="#eeeeee"><td>19</td><td>R3091SA</td><td>557</td><td>Striatum</td><td>BXD6</td><td>59</td><td>F</td></tr>
<tr bgcolor="#eeeeee"><td>20</td><td>R3092SA</td><td>547</td><td>Striatum</td><td>BXD6</td><td>59</td><td>M</td></tr>
<tr bgcolor="#eeeeee"><td>21</td><td>R3093SA</td><td>717</td><td>Striatum</td><td>BXD8</td><td>61</td><td>F</td></tr>
<tr bgcolor="#eeeeee"><td>22</td><td>R3094SA</td><td>707</td><td>Striatum</td><td>BXD8</td><td>61</td><td>M</td></tr>
<tr bgcolor="#eeeeee"><td>23</td><td>R3095SA</td><td>647</td><td>Striatum</td><td>BXD9</td><td>60</td><td>F</td></tr>
<tr bgcolor="#eeeeee"><td>24</td><td>R3096SA</td><td>637</td><td>Striatum</td><td>BXD9</td><td>60</td><td>M</td></tr>
<tr bgcolor="#eeeeee"><td>25</td><td>R3039SA</td><td>517</td><td>Striatum</td><td>BXD11</td><td>59</td><td>F</td></tr>
<tr bgcolor="#eeeeee"><td>26</td><td>R3040SA</td><td>787</td><td>Striatum</td><td>BXD11</td><td>59</td><td>M</td></tr>
<tr bgcolor="#eeeeee"><td>27</td><td>R3041SA</td><td>817</td><td>Striatum</td><td>BXD12</td><td>62</td><td>F</td></tr>
<tr bgcolor="#eeeeee"><td>28</td><td>R3042SA</td><td>807</td><td>Striatum</td><td>BXD12</td><td>59</td><td>M</td></tr>
<tr bgcolor="#eeeeee"><td>29</td><td>R3043SA</td><td>877</td><td>Striatum</td><td>BXD13</td><td>60</td><td>F</td></tr>
<tr bgcolor="#eeeeee"><td>30</td><td>R3044SA</td><td>867</td><td>Striatum</td><td>BXD13</td><td>60</td><td>M</td></tr>
<tr bgcolor="#eeeeee"><td>31</td><td>R3045SA</td><td>1067</td><td>Striatum</td><td>BXD14</td><td>59</td><td>F</td></tr>
<tr bgcolor="#eeeeee"><td>32</td><td>R3144SA</td><td>1077</td><td>Striatum</td><td>BXD14</td><td>59</td><td>M</td></tr>
<tr bgcolor="#eeeeee"><td>33</td><td>R3047SA</td><td>1057</td><td>Striatum</td><td>BXD15</td><td>60</td><td>F</td></tr>
<tr bgcolor="#eeeeee"><td>34</td><td>R3048SA</td><td>1047</td><td>Striatum</td><td>BXD15</td><td>60</td><td>M</td></tr>
<tr bgcolor="#eeeeee"><td>35</td><td>R3049SA</td><td>767</td><td>Striatum</td><td>BXD16</td><td>61</td><td>F</td></tr>
<tr bgcolor="#eeeeee"><td>36</td><td>R3050SA</td><td>777</td><td>Striatum</td><td>BXD16</td><td>61</td><td>M</td></tr>
<tr bgcolor="#eeeeee"><td>37</td><td>R3051SA</td><td>1177</td><td>Striatum</td><td>BXD18</td><td>59</td><td>F</td></tr>
<tr bgcolor="#eeeeee"><td>38</td><td>R3052SA</td><td>1167</td><td>Striatum</td><td>BXD18</td><td>59</td><td>M</td></tr>
<tr bgcolor="#eeeeee"><td>39</td><td>R3053SA</td><td>957</td><td>Striatum</td><td>BXD19</td><td>60</td><td>F</td></tr>
<tr bgcolor="#eeeeee"><td>40</td><td>R3054SA</td><td>947</td><td>Striatum</td><td>BXD19</td><td>60</td><td>M</td></tr>
<tr bgcolor="#eeeeee"><td>41</td><td>R3057SA</td><td>1255</td><td>Striatum</td><td>BXD20</td><td>60</td><td>F</td></tr>
<tr bgcolor="#eeeeee"><td>42</td><td>R3058SA</td><td>1245</td><td>Striatum</td><td>BXD20</td><td>60</td><td>M</td></tr>
<tr bgcolor="#eeeeee"><td>43</td><td>R3059SA</td><td>1197</td><td>Striatum</td><td>BXD21</td><td>48</td><td>F</td></tr>
<tr bgcolor="#eeeeee"><td>44</td><td>R3060SA</td><td>1187</td><td>Striatum</td><td>BXD21</td><td>48</td><td>M</td></tr>
<tr bgcolor="#eeeeee"><td>45</td><td>R3061SA</td><td>1235</td><td>Striatum</td><td>BXD22</td><td>58</td><td>F</td></tr>
<tr bgcolor="#eeeeee"><td>46</td><td>R3062SA</td><td>1275</td><td>Striatum</td><td>BXD22</td><td>60</td><td>M</td></tr>
<tr bgcolor="#eeeeee"><td>47</td><td>R3063SA</td><td>1137</td><td>Striatum</td><td>BXD23</td><td>60</td><td>F</td></tr>
<tr bgcolor="#eeeeee"><td>48</td><td>R3064SA</td><td>1127</td><td>Striatum</td><td>BXD23</td><td>60</td><td>M</td></tr>
<tr bgcolor="#eeeeee"><td>49</td><td>R3065SA</td><td>437</td><td>Striatum</td><td>BXD24</td><td>59</td><td>F</td></tr>
<tr bgcolor="#eeeeee"><td>50</td><td>R3066SA</td><td>587</td><td>Striatum</td><td>BXD24</td><td>60</td><td>M</td></tr>
<tr bgcolor="#eeeeee"><td>51</td><td>R3067SA</td><td>1107</td><td>Striatum</td><td>BXD27</td><td>60</td><td>F</td></tr>
<tr bgcolor="#eeeeee"><td>52</td><td>R3068SA</td><td>1117</td><td>Striatum</td><td>BXD27</td><td>60</td><td>M</td></tr>
<tr bgcolor="#eeeeee"><td>53</td><td>R3069SA</td><td>1027</td><td>Striatum</td><td>BXD28</td><td>60</td><td>F</td></tr>
<tr bgcolor="#eeeeee"><td>54</td><td>R3070SA</td><td>1037</td><td>Striatum</td><td>BXD28</td><td>60</td><td>M</td></tr>
<tr bgcolor="#eeeeee"><td>55</td><td>R3071SA</td><td>1007</td><td>Striatum</td><td>BXD29</td><td>58</td><td>F</td></tr>
<tr bgcolor="#eeeeee"><td>56</td><td>R3072SA</td><td>1017</td><td>Striatum</td><td>BXD29</td><td>58</td><td>M</td></tr>
<tr bgcolor="#eeeeee"><td>57</td><td>R3073SA</td><td>997</td><td>Striatum</td><td>BxD31</td><td>60</td><td>F</td></tr>
<tr bgcolor="#eeeeee"><td>58</td><td>R3074SA</td><td>987</td><td>Striatum</td><td>BxD31</td><td>60</td><td>M</td></tr>
<tr bgcolor="#eeeeee"><td>59</td><td>R3075SA</td><td>917</td><td>Striatum</td><td>BXD32</td><td>57</td><td>F</td></tr>
<tr bgcolor="#eeeeee"><td>60</td><td>R3076SA</td><td>907</td><td>Striatum</td><td>BXD32</td><td>57</td><td>M</td></tr>
<tr bgcolor="#eeeeee"><td>61</td><td>R3077SA</td><td>897</td><td>Striatum</td><td>BXD33</td><td>59</td><td>F</td></tr>
<tr bgcolor="#eeeeee"><td>62</td><td>R3078SA</td><td>887</td><td>Striatum</td><td>BXD33</td><td>59</td><td>M</td></tr>
<tr bgcolor="#eeeeee"><td>63</td><td>R3079SA</td><td>837</td><td>Striatum</td><td>BXD34</td><td>60</td><td>F</td></tr>
<tr bgcolor="#eeeeee"><td>64</td><td>R3080SA</td><td>827</td><td>Striatum</td><td>BXD34</td><td>60</td><td>M</td></tr>
<tr bgcolor="#eeeeee"><td>65</td><td>R3081SA</td><td>857</td><td>Striatum</td><td>BXD36</td><td>57</td><td>F</td></tr>
<tr bgcolor="#eeeeee"><td>66</td><td>R3082SA</td><td>847</td><td>Striatum</td><td>BXD36</td><td>57</td><td>M</td></tr>
<tr bgcolor="#eeeeee"><td>67</td><td>R3083SA</td><td>697</td><td>Striatum</td><td>BXD38</td><td>60</td><td>F</td></tr>
<tr bgcolor="#eeeeee"><td>68</td><td>R3084SA</td><td>687</td><td>Striatum</td><td>BXD38</td><td>60</td><td>M</td></tr>
<tr bgcolor="#eeeeee"><td>69</td><td>R3085SA</td><td>677</td><td>Striatum</td><td>BXD40</td><td>60</td><td>F</td></tr>
<tr bgcolor="#eeeeee"><td>70</td><td>R3086SA</td><td>667</td><td>Striatum</td><td>BXD40</td><td>60</td><td>M</td></tr>
<tr bgcolor="#eeeeee"><td>71</td><td>R3087SA</td><td>577</td><td>Striatum</td><td>BXD42</td><td>58</td><td>F</td></tr>
<tr bgcolor="#eeeeee"><td>72</td><td>R3088SA</td><td>567</td><td>Striatum</td><td>BXD42</td><td>58</td><td>M</td></tr>
<tr bgcolor="#eeeeee"><td>73</td><td>R3097SA</td><td>1975</td><td>Striatum</td><td>BXSB/MpJ</td><td>61</td><td>F</td></tr>
<tr bgcolor="#eeeeee"><td>74</td><td>R3098SA</td><td>1945</td><td>Striatum</td><td>BXSB/MpJ</td><td>61</td><td>M</td></tr>
<tr bgcolor="#eeeeee"><td>75</td><td>R3099SA</td><td>1575</td><td>Striatum</td><td>C3H/HeJ</td><td>60</td><td>F</td></tr>
<tr bgcolor="#eeeeee"><td>76</td><td>R3100SA</td><td>1595</td><td>Striatum</td><td>C3H/HeJ</td><td>60</td><td>M</td></tr>
<tr bgcolor="#eeeeee"><td>77</td><td>R3101SA</td><td>1228</td><td>Striatum</td><td>C57BL/6J</td><td>58</td><td>F</td></tr>
<tr bgcolor="#eeeeee"><td>78</td><td>R3102SA</td><td>343</td><td>Striatum</td><td>C57BL/6J</td><td>59</td><td>M</td></tr>
<tr bgcolor="#eeeeee"><td>79</td><td>R3103SA (sample removed)</td><td>2305</td><td>Striatum</td><td>CAST/Ei</td><td>61</td><td>F</td></tr>
<tr bgcolor="#eeeeee"><td>80</td><td>R3104SA (sample removed)</td><td>2285</td><td>Striatum</td><td>CAST/Ei</td><td>59</td><td>M</td></tr>
<tr bgcolor="#eeeeee"><td>81</td><td>R3105SA</td><td>1223</td><td>Striatum</td><td>DBA/2J</td><td>58</td><td>F</td></tr>
<tr bgcolor="#eeeeee"><td>82</td><td>R3106SA</td><td>344</td><td>Striatum</td><td>DBA/2J</td><td>59</td><td>M</td></tr>
<tr bgcolor="#eeeeee"><td>83</td><td>R3107SA</td><td>1535</td><td>Striatum</td><td>FVB/NJ</td><td>60</td><td>F</td></tr>
<tr bgcolor="#eeeeee"><td>84</td><td>R3108SA</td><td>1555</td><td>Striatum</td><td>FVB/NJ</td><td>60</td><td>M</td></tr>
<tr bgcolor="#eeeeee"><td>85</td><td>R3109SA</td><td>1845</td><td>Striatum</td><td>KK/HlJ</td><td>61</td><td>F</td></tr>
<tr bgcolor="#eeeeee"><td>86</td><td>R3110SA</td><td>1835</td><td>Striatum</td><td>KK/HlJ</td><td>61</td><td>M</td></tr>
<tr bgcolor="#eeeeee"><td>87</td><td>R3111SA</td><td>1865</td><td>Striatum</td><td>MOLF/EiJ</td><td>60</td><td>F</td></tr>
<tr bgcolor="#eeeeee"><td>88</td><td>R3112SA</td><td>1855</td><td>Striatum</td><td>MOLF/EiJ</td><td>60</td><td>M</td></tr>
<tr bgcolor="#eeeeee"><td>89</td><td>R3113SA</td><td>1295</td><td>Striatum</td><td>NOD/LtJ</td><td>58</td><td>F</td></tr>
<tr bgcolor="#eeeeee"><td>90</td><td>R3114SA</td><td>1315</td><td>Striatum</td><td>NOD/LtJ</td><td>58</td><td>M</td></tr>
<tr bgcolor="#eeeeee"><td>91</td><td>R3115SA</td><td>2075</td><td>Striatum</td><td>NZB/BlNJ</td><td>61</td><td>F</td></tr>
<tr bgcolor="#eeeeee"><td>92</td><td>R3116SA</td><td>1515</td><td>Striatum</td><td>NZB/BlNJ</td><td>58</td><td>M</td></tr>
<tr bgcolor="#eeeeee"><td>93</td><td>R3117SA</td><td>1745</td><td>Striatum</td><td>NZO/HlLtJ</td><td>61</td><td>F</td></tr>
<tr bgcolor="#eeeeee"><td>94</td><td>R3118SA</td><td>1725</td><td>Striatum</td><td>NZO/HlLtJ</td><td>61</td><td>M</td></tr>
<tr bgcolor="#eeeeee"><td>95</td><td>R3119SA</td><td>1805</td><td>Striatum</td><td>NZW/LacJ</td><td>65</td><td>F</td></tr>
<tr bgcolor="#eeeeee"><td>96</td><td>R3120SA</td><td>1685</td><td>Striatum</td><td>NZW/LacJ</td><td>70</td><td>M</td></tr>
<tr bgcolor="#eeeeee"><td>97</td><td>R3121SA</td><td>1875</td><td>Striatum</td><td>PWD/PhJ</td><td>70</td><td>F</td></tr>
<tr bgcolor="#eeeeee"><td>98</td><td>R3122SA</td><td>1885</td><td>Striatum</td><td>PWD/PhJ</td><td>70</td><td>M</td></tr>
<tr bgcolor="#eeeeee"><td>99</td><td>R3123SA</td><td>1765</td><td>Striatum</td><td>PWK/PhJ</td><td>59</td><td>F</td></tr>
<tr bgcolor="#eeeeee"><td>100</td><td>R3124SA</td><td>1785</td><td>Striatum</td><td>PWK/PhJ</td><td>60</td><td>M</td></tr>
<tr bgcolor="#eeeeee"><td>101</td><td>R3125SA</td><td>1825</td><td>Striatum</td><td>WSB/EiJ</td><td>71</td><td>F</td></tr>
<tr bgcolor="#eeeeee"><td>102</td><td>R3126SA</td><td>1655</td><td>Striatum</td><td>WSB/EiJ</td><td>71</td><td>M</td></tr></table>
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</Blockquote>
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