1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
|
import re
import requests
from lxml.html import parse
from requests.exceptions import ConnectionError
DO_FAIL=False # fail on error
def is_root_link(link):
pattern = re.compile("^/$")
return pattern.match(link)
def is_mailto_link(link):
pattern = re.compile("^mailto:.*")
return pattern.match(link)
def is_internal_link(link):
pattern = re.compile("^/.*")
return pattern.match(link)
def is_in_page_link(link):
pattern = re.compile("^#.*")
return pattern.match(link)
def get_links(doc):
return [x for x in [y.get("href") for y in doc.cssselect("a")] if not (
is_root_link(x)
or is_mailto_link(x))]
def verify_link(link):
if link[0] == "#":
# local link on page
return
print("verifying "+link)
try:
result = requests.get(link, timeout=20, verify=False)
if result.status_code == 200:
print(link+" ==> OK")
elif result.status_code == 307:
print(link+" ==> REDIRECT")
else:
print("ERROR: link `"+link+"` failed with status "
, result.status_code)
if DO_FAIL:
raise Exception("Failed verify")
except ConnectionError as ex:
print("ERROR: ", link, ex)
if DO_FAIL:
raise ex
def verify_static_file(link):
print("verifying "+link)
try:
result = requests.get(link, timeout=20, verify=False)
if (result.status_code == 200 and
result.content.find(bytes("Error: 404 Not Found", "utf-8")) <= 0):
print(link+" ==> OK")
else:
print("ERROR: link {}".format(link))
raise Exception("Failed verify")
except ConnectionError as ex:
print("ERROR: ", link, ex)
def check_page(host, start_url):
print("")
print("Checking links host "+host+" in page `"+start_url+"`")
doc = parse(start_url).getroot()
links = get_links(doc)
in_page_links = list(filter(is_in_page_link, links))
internal_links = list(filter(is_internal_link, links))
external_links = [x for x in links if not (is_internal_link(x) or is_in_page_link(x))]
for link in internal_links:
verify_link(host+link)
for link in external_links:
verify_link(link)
def check_links(args_obj, parser):
print("")
print("Checking links")
host = args_obj.host
# Check the home page
check_page(host, host)
# Check traits page
check_page(
host,
host+"/show_trait?trait_id=1435395_s_at&dataset=HC_M2_0606_P")
def check_packaged_js_files(args_obj, parser):
host = args_obj.host
js_files = [
# Datatables Extensions:
"/css/DataTablesExtensions/buttonsBootstrap/css/buttons.bootstrap.css",
"/js/DataTablesExtensions/buttons/js/dataTables.buttons.min.js",
"/css/DataTablesExtensions/buttonStyles/css/buttons.dataTables.min.css",
"/js/DataTablesExtensions/buttons/js/dataTables.buttons.min.js",
"/js/DataTablesExtensions/colResize/dataTables.colResize.js",
"/js/DataTablesExtensions/colReorder/js/dataTables.colReorder.js",
"/js/DataTablesExtensions/buttons/js/buttons.colVis.min.js",
"/js/DataTables/js/jquery.dataTables.js",
"/css/DataTablesExtensions/scroller/css/scroller.dataTables.min.css",
# Datatables plugins:
"/js/DataTablesExtensions/plugins/sorting/natural.js",
"/js/DataTablesExtensions/plugins/sorting/scientific.js",
# Other js libraries
"/js/chroma/chroma.min.js",
"/js/d3-tip/d3-tip.js",
"/js/d3js/d3.min.js",
"/js/js_alt/underscore.min.js",
"/js/nvd3/nv.d3.min.css",
"/js/qtip2/jquery.qtip.min.js",
"/js/js_alt/md5.min.js",
]
print("Checking links")
for link in js_files:
verify_static_file(host+link)
|
