From c8a0287f7059e1d723ae4b57eee88f3a4937d2f2 Mon Sep 17 00:00:00 2001
From: zsloan
Date: Fri, 5 Apr 2019 15:03:04 -0500
Subject: Fixed issue that caused error for phenotype searches (kind of a quick
 fix and I do a try/except for whether it can build the trait object; ideally
 I should correctly filter out datasets)

---
 wqflask/wqflask/gsearch.py | 9 ++++++---
 1 file changed, 6 insertions(+), 3 deletions(-)

(limited to 'wqflask')

diff --git a/wqflask/wqflask/gsearch.py b/wqflask/wqflask/gsearch.py
index 287ffde2..7cd8e543 100644
--- a/wqflask/wqflask/gsearch.py
+++ b/wqflask/wqflask/gsearch.py
@@ -170,8 +170,11 @@ class GSearch(object):
                     #this_trait = GeneralTrait(dataset=dataset, name=trait_id, get_qtl_info=True, get_sample_info=False)
                     this_trait['max_lrs_text'] = "N/A"
                     if this_trait['dataset'] == this_trait['group'] + "Publish":
-                      trait_ob = GeneralTrait(dataset_name=this_trait['dataset'], name=this_trait['name'], get_qtl_info=True, get_sample_info=False)
-                      if trait_ob.locus_chr != "" and trait_ob.locus_mb != "":
-                          this_trait['max_lrs_text'] = "Chr" + str(trait_ob.locus_chr) + ": " + str(trait_ob.locus_mb)
+                      try:
+                        trait_ob = GeneralTrait(dataset_name=this_trait['dataset'], name=this_trait['name'], get_qtl_info=True, get_sample_info=False)
+                        if trait_ob.locus_chr != "" and trait_ob.locus_mb != "":
+                            this_trait['max_lrs_text'] = "Chr" + str(trait_ob.locus_chr) + ": " + str(trait_ob.locus_mb)
+                      except:
+                          this_trait['max_lrs_text'] = "N/A"
 
                     self.trait_list.append(this_trait)
-- 
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