From 66ea1d85feb8cb17a5e8ef9429b7f5353243d634 Mon Sep 17 00:00:00 2001 From: zsloan Date: Wed, 9 Dec 2020 15:19:01 -0600 Subject: Fixed another string formatting mistake with setting the bootstrap output file --- wqflask/wqflask/marker_regression/qtlreaper_mapping.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) (limited to 'wqflask') diff --git a/wqflask/wqflask/marker_regression/qtlreaper_mapping.py b/wqflask/wqflask/marker_regression/qtlreaper_mapping.py index b2eb58ae..8341ee55 100644 --- a/wqflask/wqflask/marker_regression/qtlreaper_mapping.py +++ b/wqflask/wqflask/marker_regression/qtlreaper_mapping.py @@ -34,7 +34,7 @@ def run_reaper(this_trait, this_dataset, samples, vals, json_data, num_perm, boo opt_list.append("-b") opt_list.append(f"--n_bootstrap {str(num_bootstrap)}") - opt_list.append(f"--bootstrap_output{webqtlConfig.GENERATED_IMAGE_DIR}{bootstrap_filename}.txt") + opt_list.append(f"--bootstrap_output {webqtlConfig.GENERATED_IMAGE_DIR}{bootstrap_filename}.txt") if num_perm > 0: permu_filename =("{this_dataset.group.name}_PERM_" + ''.join(random.choice(string.ascii_uppercase + -- cgit v1.2.3