From 4487dca75a35fc69dc289f1b61a819831eeb9f4e Mon Sep 17 00:00:00 2001
From: zsloan
Date: Mon, 24 Apr 2023 19:21:25 +0000
Subject: Use cached sample data in scatter plots (when applicable)

---
 wqflask/wqflask/correlation/corr_scatter_plot.py | 21 +++++++++++++--------
 wqflask/wqflask/templates/mapping_results.html   |  2 +-
 2 files changed, 14 insertions(+), 9 deletions(-)

(limited to 'wqflask')

diff --git a/wqflask/wqflask/correlation/corr_scatter_plot.py b/wqflask/wqflask/correlation/corr_scatter_plot.py
index 5df28c45..e5f545a2 100644
--- a/wqflask/wqflask/correlation/corr_scatter_plot.py
+++ b/wqflask/wqflask/correlation/corr_scatter_plot.py
@@ -1,9 +1,13 @@
+import json
 import math
 
+from redis import Redis
+Redis = Redis()
+
 from flask import g
 
 from base.trait import create_trait, retrieve_sample_data
-from base import data_set
+from base import data_set, webqtlCaseData
 from utility import corr_result_helpers
 from scipy import stats
 import numpy as np
@@ -39,13 +43,14 @@ class CorrScatterPlot:
         if self.dataset_1.group.f1list != None:
             primary_samples += self.dataset_1.group.f1list
 
-        self.trait_1 = retrieve_sample_data(
-            self.trait_1, self.dataset_1, primary_samples)
-        self.trait_2 = retrieve_sample_data(
-            self.trait_2, self.dataset_2, primary_samples)
-
-        samples_1, samples_2, num_overlap = corr_result_helpers.normalize_values_with_samples(
-            self.trait_1.data, self.trait_2.data)
+        if 'dataid' in params:
+            trait_data_dict = json.loads(Redis.get(params['dataid']))
+            trait_data = {key:webqtlCaseData.webqtlCaseData(key, float(trait_data_dict[key])) for (key, value) in trait_data_dict.items() if trait_data_dict[key] != "x"}
+            samples_1, samples_2, num_overlap = corr_result_helpers.normalize_values_with_samples(
+                self.trait_1.data, trait_data)
+        else:
+            samples_1, samples_2, num_overlap = corr_result_helpers.normalize_values_with_samples(
+                self.trait_1.data, self.trait_2.data)
 
         self.data = []
         self.indIDs = list(samples_1.keys())
diff --git a/wqflask/wqflask/templates/mapping_results.html b/wqflask/wqflask/templates/mapping_results.html
index e77bbad3..b1e1b5c8 100644
--- a/wqflask/wqflask/templates/mapping_results.html
+++ b/wqflask/wqflask/templates/mapping_results.html
@@ -420,7 +420,7 @@
                 'data': null,
                 'render': function(data, type, row, meta) {
                   {% if geno_db_exists == "True" %}
-                  return '<a target"_blank" href="corr_scatter_plot?method=pearson&dataset_1={{ dataset.group.name }}Geno&dataset_2={{ dataset.name }}&trait_1=' + data.name + '&trait_2={{ this_trait.name }}">' + String(parseFloat(data.additive).toFixed(3)) + '</a>'
+                  return '<a target"_blank" href="corr_scatter_plot?method=pearson&dataset_1={{ dataset.group.name }}Geno&dataset_2={{ dataset.name }}&trait_1=' + data.name + '&trait_2={{ this_trait.name }}&dataid={{ dataid }}">' + String(parseFloat(data.additive).toFixed(3)) + '</a>'
                   {% else %}
                   return String(parseFloat(data.additive).toFixed(3))
                   {% endif %}
-- 
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