From 1ac412ce0273081fc8df8296b4d03d46e4922fd8 Mon Sep 17 00:00:00 2001 From: BonfaceKilz Date: Sat, 26 Sep 2020 01:18:40 +0300 Subject: Apply PEP 8 to buffer * wqflask/wqflask/db_info.py: Run pep8 through buffers. Fixes inconsistent use of tabs and spaces in indentation which trips up unittests. --- wqflask/wqflask/db_info.py | 31 +++++++++++++++++++++---------- 1 file changed, 21 insertions(+), 10 deletions(-) (limited to 'wqflask') diff --git a/wqflask/wqflask/db_info.py b/wqflask/wqflask/db_info.py index 45a4c96e..f420b472 100644 --- a/wqflask/wqflask/db_info.py +++ b/wqflask/wqflask/db_info.py @@ -1,10 +1,14 @@ -import http.client, urllib.request, urllib.error, urllib.parse +import http.client +import urllib.request +import urllib.error +import urllib.parse import re from flask import Flask, g from utility.logger import getLogger -logger = getLogger(__name__ ) +logger = getLogger(__name__) + class InfoPage(object): def __init__(self, start_vars): @@ -38,12 +42,15 @@ class InfoPage(object): "LEFT JOIN DatasetStatus USING (DatasetStatusId) WHERE ") if self.gn_accession_id: - final_query = query_base + "GN_AccesionId = {}".format(self.gn_accession_id) + final_query = query_base + \ + "GN_AccesionId = {}".format(self.gn_accession_id) results = g.db.execute(final_query).fetchone() if self.info_page_name and not results: - final_query = query_base + "InfoPageName={}".format(self.info_page_name) + final_query = query_base + \ + "InfoPageName={}".format(self.info_page_name) elif self.info_page_name: - final_query = query_base + "InfoPageName={}".format(self.info_page_name) + final_query = query_base + \ + "InfoPageName={}".format(self.info_page_name) results = g.db.execute(final_query).fetchone() else: raise 'No correct parameter found' @@ -52,18 +59,20 @@ class InfoPage(object): self.info = process_query_results(results) if (not results or len(results) < 1) and self.info_page_name and create: - insert_sql = "INSERT INTO InfoFiles SET InfoFiles.InfoPageName={}".format(self.info_page_name) + insert_sql = "INSERT INTO InfoFiles SET InfoFiles.InfoPageName={}".format( + self.info_page_name) return self.get_info() if not self.gn_accession_id and self.info: self.gn_accession_id = self.info['accession_id'] if not self.info_page_name and self.info: - self.info_page_name = self.info['info_page_name'] + self.info_page_name = self.info['info_page_name'] def get_datasets_list(self): self.filelist = [] try: - response = urllib.request.urlopen("http://datafiles.genenetwork.org/download/GN%s" % self.gn_accession_id) + response = urllib.request.urlopen( + "http://datafiles.genenetwork.org/download/GN%s" % self.gn_accession_id) data = response.read() matches = re.findall(r"