From f4fbb6d53419a19c6ee67977d18605cdcbb09c0e Mon Sep 17 00:00:00 2001 From: zsloan Date: Thu, 12 Aug 2021 22:35:53 +0000 Subject: add function for reading in JSON file that lists sample lists unique to each study within a group (in this case only BXD Longevity for now) --- wqflask/base/data_set.py | 9 +++++++++ 1 file changed, 9 insertions(+) (limited to 'wqflask/base') diff --git a/wqflask/base/data_set.py b/wqflask/base/data_set.py index 4cb82665..b8f2f9fb 100644 --- a/wqflask/base/data_set.py +++ b/wqflask/base/data_set.py @@ -398,6 +398,15 @@ class DatasetGroup: if maternal and paternal: self.parlist = [maternal, paternal] + def get_study_samplelists(self): + study_sample_file = "%s/study_sample_lists/%s.json" % (webqtlConfig.GENODIR, self.name) + try: + f = open(study_sample_file) + except: + return None + study_samples = json.load(f) + return study_samples + def get_genofiles(self): jsonfile = "%s/%s.json" % (webqtlConfig.GENODIR, self.name) try: -- cgit v1.2.3