From 97ccc478543a7bb08fe0cf178e320dd5811d8bfa Mon Sep 17 00:00:00 2001
From: Pjotr Prins
Date: Sat, 10 Feb 2018 07:53:53 +0000
Subject: Check for bimbam path and bail out if it is missing

---
 wqflask/base/webqtlConfig.py | 1 +
 1 file changed, 1 insertion(+)

(limited to 'wqflask/base')

diff --git a/wqflask/base/webqtlConfig.py b/wqflask/base/webqtlConfig.py
index 1ef2bc26..1e66e957 100644
--- a/wqflask/base/webqtlConfig.py
+++ b/wqflask/base/webqtlConfig.py
@@ -82,6 +82,7 @@ assert_writable_dir(GENERATED_TEXT_DIR)
 # Flat file directories
 GENODIR              = flat_files('genotype')+'/'
 assert_dir(GENODIR)
+assert_dir(GENODIR+'bimbam') # for gemma
 
 # JSON genotypes are OBSOLETE
 JSON_GENODIR         = flat_files('genotype/json')+'/'
-- 
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