From 74ba4029f0160f0c4708a8c4b291c05184d3993d Mon Sep 17 00:00:00 2001
From: zsloan
Date: Mon, 9 Nov 2015 17:38:50 +0000
Subject: Fixed issue that caused mapping to not work; for some reason the path
 to pylmm was wrong

---
 wqflask/base/data_set.py | 5 ++++-
 1 file changed, 4 insertions(+), 1 deletion(-)

(limited to 'wqflask/base/data_set.py')

diff --git a/wqflask/base/data_set.py b/wqflask/base/data_set.py
index d6a46c2e..5603fe2e 100755
--- a/wqflask/base/data_set.py
+++ b/wqflask/base/data_set.py
@@ -158,7 +158,10 @@ class Markers(object):
     """Todo: Build in cacheing so it saves us reading the same file more than once"""
     def __init__(self, name):
         json_data_fh = open(os.path.join(webqtlConfig.NEWGENODIR + name + '.json'))
-        markers = json.load(json_data_fh)
+        try:
+            markers = json.load(json_data_fh)
+        except:
+            markers = []
     
         for marker in markers:
             if (marker['chr'] != "X") and (marker['chr'] != "Y"):
-- 
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