From 36dc2d077debe2c82f13b67887689bd11025cf1b Mon Sep 17 00:00:00 2001 From: Pjotr Prins Date: Wed, 25 May 2016 07:42:55 +0000 Subject: Docs: database reverse engineering --- doc/database.svg | 867 +++++++++++++++++++++++++++++++++++++++++++++++++++++++ 1 file changed, 867 insertions(+) create mode 100644 doc/database.svg (limited to 'doc/database.svg') diff --git a/doc/database.svg b/doc/database.svg new file mode 100644 index 00000000..ae9d55a5 --- /dev/null +++ b/doc/database.svg @@ -0,0 +1,867 @@ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + image/svg+xml + + + + + + + + + + ProbesetData + + + id + strainid + + value + ProbeSetXRef + + ProbeSetFreezeId + ProbeSetID + DataId + pValue + + ProbesetFreeze + ProbeFreezeId + Name + + + + + + + + + + DB + + ProbeFreeze + id + ProbeFreezeId + TissueId + id + + = + + + + + Strain + id + name + + + ProbeSet + id + name + many infos + + + -- cgit v1.2.3 From 5925dc7199a9fc6766c0468f5625068d1bd9603f Mon Sep 17 00:00:00 2001 From: Pjotr Prins Date: Wed, 25 May 2016 08:21:30 +0000 Subject: Docs: database reverse engineering --- doc/database.org | 16 +++++++++++++++- doc/database.svg | 21 ++++++++++++++++++--- 2 files changed, 33 insertions(+), 4 deletions(-) (limited to 'doc/database.svg') diff --git a/doc/database.org b/doc/database.org index 6e0f42c9..2221c4fb 100644 --- a/doc/database.org +++ b/doc/database.org @@ -681,7 +681,21 @@ No longer used ** Species & Strain (should be sample) -Menu +select * from Species; ++----+-----------+----------------------+----------------+----------------------+-------------------------+------------+---------+ +| Id | SpeciesId | SpeciesName | Name | MenuName | FullName | TaxonomyId | OrderId | ++----+-----------+----------------------+----------------+----------------------+-------------------------+------------+---------+ +| 1 | 1 | Mouse | mouse | Mouse | Mus musculus | 10090 | 30 | +| 2 | 2 | Rat | rat | Rat | Rattus norvegicus | 10116 | 40 | +| 3 | 3 | Arabidopsis thaliana | arabidopsis | Arabidopsis thaliana | Arabidopsis thaliana | 3702 | 60 | +| 4 | 4 | Human | human | Human | Homo sapiens | 9606 | 10 | +| 5 | 5 | Barley | barley | Barley | Hordeum vulgare | 4513 | 70 | +| 6 | 6 | Drosophila | drosophila | Drosophila | Drosophila melanogaster | 7227 | 50 | +| 7 | 7 | Macaque monkey | macaque monkey | Macaque monkey | Macaca mulatta | 9544 | 20 | +| 8 | 8 | Soybean | soybean | Soybean | Soybean | 3847 | 80 | +| 9 | 9 | Tomato | tomato | Tomato | Tomato | 4081 | 90 | ++----+-----------+----------------------+----------------+----------------------+-------------------------+------------+---------+ + ** InbredSet diff --git a/doc/database.svg b/doc/database.svg index ae9d55a5..9ddc2f47 100644 --- a/doc/database.svg +++ b/doc/database.svg @@ -15,7 +15,7 @@ id="svg2" version="1.1" inkscape:version="0.91 r13725" - sodipodi:docname="drawing.svg"> + sodipodi:docname="database.svg"> image/svg+xml - + @@ -863,5 +863,20 @@ inkscape:connector-curvature="0" inkscape:transform-center-x="-32.453094" inkscape:transform-center-y="114.65633" /> + speciesid -- cgit v1.2.3