From 918dcce5f42fcbe9327eb30bac06a69000a1fc8b Mon Sep 17 00:00:00 2001
From: Pjotr Prins
Date: Sat, 25 Jul 2020 16:47:24 +0100
Subject: Updating docs and show how to include a local Python module

---
 bin/genenetwork2 | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

(limited to 'bin')

diff --git a/bin/genenetwork2 b/bin/genenetwork2
index 3ae08e0a..dd6db7d6 100755
--- a/bin/genenetwork2
+++ b/bin/genenetwork2
@@ -121,7 +121,7 @@ if [ -z $GN2_PROFILE ]; then
     read -p "PRESS [ENTER] TO CONTINUE..."
 else
     export PATH=$GN2_PROFILE/bin:$PATH
-    export PYTHONPATH="$GN2_PROFILE/lib/python2.7/site-packages" # never inject another PYTHONPATH!!
+    export PYTHONPATH="$PYTHON_GN_PATH:$GN2_PROFILE/lib/python2.7/site-packages" # never inject another PYTHONPATH!!
     export R_LIBS_SITE=$GN2_PROFILE/site-library
     export JS_GUIX_PATH=$GN2_PROFILE/share/genenetwork2/javascript
     export GUIX_GTK3_PATH="$GN2_PROFILE/lib/gtk-3.0"
@@ -154,7 +154,7 @@ if [ ! -d $R_LIBS_SITE ] ; then
 fi
 
 # We may change this one:
-export PYTHONPATH=$GN2_BASE_DIR/wqflask:$PYTHONPATH
+export PYTHONPATH=$PYTHON_GN_PATH:$GN2_BASE_DIR/wqflask:$PYTHONPATH
 
 # Our UNIX TMPDIR defaults to /tmp - change this on a shared server
 if [ -z $TMPDIR ]; then
-- 
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