From 8b2598efcf276ef6a1edd06921a9cc28dbfcad14 Mon Sep 17 00:00:00 2001
From: pjotrp
Date: Tue, 1 Mar 2016 09:13:30 +0000
Subject: Handle settings in guix store

---
 bin/genenetwork2 | 9 ++++++---
 1 file changed, 6 insertions(+), 3 deletions(-)

(limited to 'bin')

diff --git a/bin/genenetwork2 b/bin/genenetwork2
index e5f04ee1..682d8b3d 100755
--- a/bin/genenetwork2
+++ b/bin/genenetwork2
@@ -11,12 +11,15 @@ SCRIPT=$(readlink -f "$0")
 GN2_BASE_PATH=$(dirname $(dirname "$SCRIPT"))
 echo $GN2_BASE_PATH
 
-# Handle setting parameter
+# Handle settings parameter
 settings=$1
 if [ -z $settings ]; then settings=$GN2_BASE_PATH/etc/default_settings.py ; fi
 if [ ! -e $settings ]; then
-    echo "ERROR: can not load settings file $settings"
-    exit 1
+    settings=$GN2_BASE_PATH/lib/python2.7/site-packages/genenetwork2-2.0-py2.7.egg/etc/default_settings.py
+    if [ ! -e $settings ]; then
+        echo "ERROR: can not locate settings file - pass it in the command line"
+        exit 1
+    fi
 fi
 export WQFLASK_SETTINGS=$settings
 
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