From aac1dd2f9c5b216b24c6e35676ba5d50f9d5d3c2 Mon Sep 17 00:00:00 2001
From: Zachary Sloan
Date: Thu, 13 Jun 2013 20:15:30 +0000
Subject: Put the template html for the quick search page when all trait types
 are displayed in a separate file that is included in quick_search.html

---
 wqflask/wqflask/templates/all_results.html | 134 +++++++++++++++++++++++++++++
 1 file changed, 134 insertions(+)
 create mode 100644 wqflask/wqflask/templates/all_results.html

diff --git a/wqflask/wqflask/templates/all_results.html b/wqflask/wqflask/templates/all_results.html
new file mode 100644
index 00000000..a42e42d8
--- /dev/null
+++ b/wqflask/wqflask/templates/all_results.html
@@ -0,0 +1,134 @@
+            <ul class="nav nav-tabs">
+                {% for species in species_groups %}
+                <li> <a href="#tab{{ loop.index }}" data-toggle="tab">{{ species }}</a></li>
+                {% endfor %}
+            </ul>
+            <div class="tab-content">
+                {% for species in species_groups %}
+                <div class="tab-pane active" id="tab{{ loop.index }}">
+                    <div class="tabbable tabs-left">
+                        <ul class="nav nav-tabs">
+                            {% if species_groups[species]['phenotype'] %}
+                            <li class="active"> <a href="#tab{{ loop.index }}_1" data-toggle="tab">Phenotype</a></li>
+                            {% endif %}
+                            {% if species_groups[species]['mrna_assay'] %}
+                            <li> <a href="#tab{{ loop.index }}_2" data-toggle="tab">mRNA Assay</a></li>
+                            {% endif %}
+                            {% if species_groups[species]['genotype'] %}
+                            <li> <a href="#tab{{ loop.index }}_3" data-toggle="tab">Genotype</a></li>
+                            {% endif %}
+                        </ul>
+                        <div class="tab-content">
+                            {% if species_groups[species]['phenotype'] %}
+                            <div class="tab-pane active" id="tab{{ loop.index }}_1">
+                                <table id="pheno_results" class="table table-hover table-striped table-bordered">
+                                    <thead>
+                                        <tr>
+                                        <th>Id</th>
+                                        <th>Species</th>
+                                        <th>Group</th>
+                                        <th>Description</th>
+                                        <th>LRS</th>
+                                        <th>Year</th>
+                                        <th>Authors</th>
+                                        </tr>
+                                    </thead>
+                                    <tbody>
+                                        {% for result in results.phenotype %}
+                                        {% if result.result_fields['species'] == species %}
+                                        <tr>
+                                            <td>{{ result.result_fields['phenotype_id'] }}</td>
+                                            <td>{{ result.result_fields['species'] }}</td>
+                                            <td>{{ result.result_fields['group_name'] }}</td>
+                                            <td>{{ result.result_fields['description'] }}</td>
+                                            <td>{{ result.result_fields['lrs'] }}</td>
+                                            <td>
+                                                <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids={{ result.result_fields['pubmed_id'] }}&dopt=Abstract">
+                                                    {{ result.result_fields['year'] }}
+                                                </a>
+                                            </td>
+                                            <td>{{ result.result_fields['authors'] }}</td>
+                                        </tr>
+                                        {% endif %}
+                                        {% endfor %}
+                                    </tbody>
+                                </table>
+                            </div>
+                            {% endif %}
+                            {% if species_groups[species]['mrna_assay'] %}
+                            <div class="tab-pane" id="tab{{ loop.index }}_2">
+                                <table id="mrna_assay_results" class="table table-hover table-striped table-bordered">
+                                    <thead>
+                                        <tr>
+                                        <th>Record ID</th>
+                                        <th>Species</th>
+                                        <th>Group</th>
+                                        <th>Data Set</th>
+                                        <th>Symbol</th>
+                                        <th>Description</th>
+                                        <th>Location</th>
+                                        <th>Mean Expr</th>
+                                        <th>Max LRS</th>
+                                        </tr>
+                                    </thead>
+                                    <tbody>
+                                        {% for result in results.mrna_assay %}
+                                        {% if result.result_fields['species'] == species %}
+                                        <tr>
+                                            <td>
+                                                <a href="http://gn2python.genenetwork.org/show_trait?trait_id={{ result.result_fields['name'] }}&dataset={{ result.result_fields['dataset'] }}"
+                                                   {{ result.result_fields['name'] }}
+                                                </a>
+                                            </td>
+                                            <td>{{ result.result_fields['species'] }}</td>
+                                            <td>{{ result.result_fields['group_name'] }}</td>
+                                            <td>{{ result.result_fields['dataset_name'] }}</td>
+                                            <td>{{ result.result_fields['symbol'] }}</td>
+                                            <td>{{ result.result_fields['description'] }}</td>
+                                            <td>{{ result.result_fields['chr'] }} : {{ result['mb'] }}</td>
+                                            <td>{{ result.result_fields['mean'] }}</td>
+                                            <td>{{ result.result_fields['lrs'] }}</td>
+                                        </tr>
+                                        {% endif %}
+                                        {% endfor %}
+                                    </tbody>
+                                </table>       
+                            </div>
+                            {% endif %}
+                            {% if species_groups[species]['genotype'] %}
+                            <div class="tab-pane" id="tab{{ loop.index }}_3">
+                                <table id="geno_results" class="table table-hover table-striped table-bordered">
+                                    <thead>
+                                        <tr>
+                                        <th>Marker</th>
+                                        <th>Species</th>
+                                        <th>Group</th>
+                                        <th>Data Set</th>
+                                        <th>Location</th>
+                                        </tr>
+                                    </thead>
+                                    <tbody>
+                                        {% for result in results.genotype %}
+                                        {% if result.result_fields['species'] == species %}
+                                        <tr>
+                                            <td>
+                                                <a href="http://gn2python.genenetwork.org/show_trait?trait_id={{ result.result_fields['marker_name'] }}&dataset={{ result.result_fields['dataset'] }}">
+                                                    {{ result.result_fields['marker_name'] }}
+                                                </a>
+                                            </td>
+                                            <td>{{ result.result_fields['species'] }}</td>
+                                            <td>{{ result.result_fields['group_name'] }}</td>
+                                            <td>{{ result.result_fields['dataset_name'] }}</td>
+                                            <td>{{ result.result_fields['chr'] }} : {{ result.result_fields['mb'] }}</td>
+                                        </tr>
+                                        {% endif %}
+                                        {% endfor %}
+                                    </tbody>
+                                </table>   
+                            </div>
+                            {% endif %}
+                        </div>
+                    </div>
+                </div>
+                {% endfor %}
+            </div>
\ No newline at end of file
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