From 8c0e0f0629d69672375159200c57136ced644572 Mon Sep 17 00:00:00 2001 From: Alexanderlacuna Date: Sun, 8 Nov 2020 21:51:11 +0300 Subject: Change defaultline argument in the build_line_list from None to empty string --- wqflask/wqflask/marker_regression/plink_mapping.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/wqflask/wqflask/marker_regression/plink_mapping.py b/wqflask/wqflask/marker_regression/plink_mapping.py index fd91b6ca..8d57d556 100644 --- a/wqflask/wqflask/marker_regression/plink_mapping.py +++ b/wqflask/wqflask/marker_regression/plink_mapping.py @@ -154,7 +154,7 @@ def parse_plink_output(output_filename, species): # function: convert line from str to list; # output: lineList list ####################################################### -def build_line_list(line=None): +def build_line_list(line=""): line_list = line.strip().split(' ')# irregular number of whitespaces between columns line_list = [item for item in line_list if item !=''] line_list = [item.strip() for item in line_list] -- cgit v1.2.3