Age | Commit message (Collapse) | Author | |
---|---|---|---|
2016-11-07 | Adding the reference to the paper, and updating the output to show the ↵ | DannyArends | |
cytoscape.js network | |||
2016-11-07 | Adding code to the ctl analysis file to output nodes and edges for cytoscape | DannyArends | |
2016-11-07 | Javascript file (based on the correlation file) to dsplay CTL networks using ↵ | DannyArends | |
cytoscape.js | |||
2016-11-02 | Fixed typos causing genofile selector to not show up in mapping options | zsloan | |
2016-11-02 | Added toggleable short and long labels to correlation matrix | zsloan | |
Fixed issue where I forgot to remove a parameter from jsonable_table_row in trait.py | |||
2016-11-02 | Merge branch 'testing' of github.com:genenetwork/genenetwork2 into development | zsloan | |
2016-11-02 | Added Scroller functionality to regular (but not global) search, which ↵ | zsloan | |
increases table load speed In order to implement Scroller (and make table look nicer), all rows are the same height and excess description/authors text is shown in a tooltip Increased table width for non-Geno DBs Fixed issue where Genotype traits did not fetch their location_repr (text for displaying location), causing that column to be blank in searches Fixed issue causing Correlation Matrix cells to not be colored corresponding with their correlation and also increased cell font a little Fixed issue where dataset link in the Correlation Page did not correctly point to corresponding GN1 page | |||
2016-10-31 | Merge branch 'lyan' into testing | Pjotr Prins | |
2016-10-31 | Use existing GENODIR - the metadata can be stored there, next to the | Pjotr Prins | |
.geno files. | |||
2016-10-31 | Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testing | Pjotr Prins | |
2016-10-31 | Fix spacing | Pjotr Prins | |
2016-10-31 | Merge branch 'master' of github.com:lyan6/genenetwork2 into lyan | Pjotr Prins | |
2016-10-29 | For those case that we have multiple genotypes we would like to add a selector. | Lei Yan | |
2016-10-25 | Just removed some extraneous spaces in trait.py | zsloan | |
2016-10-25 | Replaced the Download Table button for collection page with python version ↵ | zsloan | |
that displays metadata, etc Removed currently unused javascript and css imports related to the DataTables buttons import (since it was replaced with the python export) from regular search, both global searches, and the view_collection page Added a bunch of parameters to the jsonable function for the GeneralTrait object in order to later create a json version of the search results and implement the client-side Scroller feature (which dynamically loads table rows from json when you scroll) | |||
2016-10-21 | Added CSV table download option to both gene and pheno global search | zsloan | |
The "Database" part of the metadata isn't displayed for global search table downloads In both regular and global search, the table can not be sorted by whether the first column is checked Removed some unused datatables/javascript from the regular and global search page html | |||
2016-10-21 | Added metadata to "Download Table" | zsloan | |
Only checked traits are now downloaded and all traits are downloaded if nothing is checked | |||
2016-10-19 | Rewrote export CSV in python | zsloan | |
Still need to add metadata and change it to where only selected traits are exported | |||
2016-10-17 | Fixed issue where period sometimes appeared incorrectly in search results text. | zsloan | |
Changed formatting of a couple things in search results text (capitalizing/underlining "terms" and bolding the search term) Changed "Gene" label on trait page to "NCBI" and removed GenBank link | |||
2016-10-15 | Remove all spacing introduced by merge | Pjotr Prins | |
2016-10-13 | Merge branch 'master' of github.com:zsloan/genenetwork2 into zsloan | Pjotr Prins | |
2016-10-12 | Moved plink code out of marker_regression, though I don't think plink is ↵ | zsloan | |
working right now Ran some end of line conversion on rqtl_mapping because there were a few ^M's | |||
2016-10-12 | Removed unused gemma code from marker_regression.py and changed the order of ↵ | zsloan | |
a couple functions in collect.py to more accurately reflect when they're called | |||
2016-10-11 | Merge branch 'pjotr-gn2' into testing | Pjotr Prins | |
2016-10-09 | Handle VERSION on different pages | Pjotr Prins | |
2016-10-09 | Merge branch 'mechanize' into testing | Pjotr Prins | |
2016-10-09 | Revert on Zach tabs and trailing spaces | Pjotr Prins | |
2016-10-09 | CTL: show correct # of phenotypes also in results page | Pjotr Prins | |
2016-10-09 | Add version information | Pjotr Prins | |
2016-10-09 | Merge branch 'master' of github.com:zsloan/genenetwork2 into zsloan | Pjotr Prins | |
2016-10-09 | Changed mirrors & affiliates on wqflask/wqflask/templates/index_page_orig.html | Pjotr Prins | |
2016-10-09 | Merge branch 'twitter' into pjotr-gn2 | Pjotr Prins | |
2016-10-09 | Merge branch 'testing' into twitter | Pjotr Prins | |
2016-10-09 | Changed mirrors & affiliates on wqflask/wqflask/templates/index_page_orig.html | Pjotr Prins | |
2016-10-09 | Added links to base.html | Pjotr Prins | |
2016-10-07 | Removed qtlreaper code from marker_regression and moved it to a separate file. | zsloan | |
Fixed CTL template to display correct number of traits (previously it would display 1 fewer than you selected). | |||
2016-10-07 | Make sure JS path exists | Pjotr Prins | |
2016-10-07 | Twitter: added news list to search page | Pjotr Prins | |
2016-10-07 | Tweets on main page are working | Pjotr Prins | |
2016-10-07 | Changed error output | Pjotr Prins | |
2016-10-07 | Saner handling of TMPDIR and TEMPDIR | Pjotr Prins | |
Throw error when TMPDIRs are not writable | |||
2016-10-06 | URLs: replaced non-functioning URLs | Pjotr Prins | |
2016-10-06 | Footer: updating URLs | Pjotr Prins | |
2016-10-06 | Do not open new page in browser on URL | Pjotr Prins | |
2016-10-06 | Removed dead URL | Pjotr Prins | |
2016-10-06 | URL: replaced dead Memphis URL with current GN2 machine | Pjotr Prins | |
2016-10-06 | URL: prevent opening new pages | Pjotr Prins | |
2016-10-06 | URL: updated Amigo reference on front page | Pjotr Prins | |
2016-10-06 | URLs: update GO database URL and removed opening new browser pages | Pjotr Prins | |
2016-10-06 | Logger: add more granular debug messages | Pjotr Prins | |