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2021-05-27Fixed syntax mistake when creating dataclass in test_rqtl_mapping.pyzsloan
2021-05-27Removed parts of test_rqtl_mapping.py referring to process_perm_results and p...zsloan
2021-05-27Updated test_run_mapping.py to account for attribute keys being checked as lo...zsloan
2021-05-27Improved test_rqtl_mapping.py with Bonface's recommendation of uses dataclasseszsloan
2021-05-27Make all attribute names lowercase to deal with situations where sometimes th...zsloan
2021-05-27Add code writing perm_strata to phenotype input file in rqtl_mapping.py + fix...zsloan
2021-05-26wqflask: views: Update comment when data is edited...For now the exact column that's edited isn't tracked. BonfaceKilz
2021-05-26wqflask: views: Import "fetchone" & "update" from "gn3.db"BonfaceKilz
2021-05-26Use @admin_login_required to only enable Rob to do edits to traits...* wqflask/wqflask/decorators.py (admin_login_required): New decorator. * wqflask/wqflask/views.py (edit_trait): Use admin_login_required decorator. BonfaceKilz
2021-05-26wqflask: views: Add method that updates the trait...* wqflask/wqflask/views.py (update_trait): New function. BonfaceKilz
2021-05-26templates: edit_trait: Submit publish_xref dataBonfaceKilz
2021-05-26wqflask: views: Remove unused importsBonfaceKilz
2021-05-26wqflask: views: Make imports top-levelBonfaceKilz
2021-05-26templates: edit_trait: Make form functional(add ability to submit)BonfaceKilz
2021-05-26wqflask: views: Add edit_trait page...Should add some some authentication logic to this later since it's not supposed to be accessible to everyone. BonfaceKilz
2021-05-26templates: edit_trait: Update edit btn to point to editing endpointBonfaceKilz
2021-05-26wqflask: views: Add extra endpoint to display individual trait edit...* wqflask/wqflask/views.py (show_edit_trait_page): New function/ end-point. BonfaceKilz
2021-05-26templates: show_trait_details: Add an "[edit]" buttonBonfaceKilz
2021-05-26tests: test_gen_menu: Remove get_speciesBonfaceKilz
2021-05-26api: gen_menu: Replace get_species with get_all_species from gn3...* wqflask/wqflask/api/gen_menu.py (gen_dropdown_json): Use new `get_all_species` function. (get_species): Remove it. BonfaceKilz
2021-05-26db: webqtlDatabaseFunction: Remove commentBonfaceKilz
2021-05-26db: webqtlDatabaseFunction: Remove logger infoBonfaceKilz
2021-05-26wqflask: database: Replace one-line function with it's body...* wqflask/wqflask/database.py (init_db): Remove it. BonfaceKilz
2021-05-26templates: edit_trait: Add form for editing a dataset (WIP)BonfaceKilz
2021-05-25Fixed/shortened get_categorical_variables function and correctly pass them to...zsloan
2021-05-25Removed code that processes output files, since this functionality is moved t...zsloan
2021-05-22Fixed the mocked return_value for requests.post to fix broken testzsloan
2021-05-22Fixed a couple broken testszsloan
2021-05-22Rewrote test_rqtl_mapping.py, though haven't done tests for all functions yetzsloan
2021-05-21Removed a couple unused parameters for run_rqtlzsloan
2021-05-21run_rqtl now reads in permutation outputzsloan
2021-05-20Re-implemented R/qtl to get the results from the GN3 APIzsloan
2021-05-18Last commit failed to correctly change Y-axis position; this should fix thatzsloan
2021-05-18Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testingzsloan
2021-05-18Fixed issue that caused the sample values in the Haplotype Analyst to be off ...zsloan
2021-05-17handle None for tissue input dataAlexander Kabui
2021-05-14Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testingzsloan
2021-05-14Changed logic in SampleList to set num_cases_exists to False if all existing ...zsloan
2021-05-14Changed logic in has_num_cases to ignore N=1zsloan
2021-05-13pep8 formatting & delete commentsAlexander Kabui
2021-05-13integrate comute corr for top results in uiAlexander Kabui
2021-05-13add dataset and trait-name in ui templateAlexander Kabui
2021-05-13Fix load_phenotypes to run with GN2 latestArthur Centeno
2021-05-12Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testingzsloan
2021-05-12Remove maxlength from value/SE input fields and base the width off of the max...zsloan
2021-05-12Get max digits for each sample group's vals and create a function for getting...zsloan
2021-05-11Merge pull request #563 from Alexanderlacuna/feature/integrate-correlation-api...Feature/integrate correlation apiBonfaceKilz
2021-05-11replace font-awesomeAlexander Kabui
2021-05-11replace datatable scroller cdnAlexander Kabui
2021-05-11replace datatable scrollerAlexander Kabui
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