| Age | Commit message (Collapse) | Author | |
|---|---|---|---|
| 2012-11-27 | Created subclass for each main data set type and moved the code | Zachary Sloan | |
| for getting trait info that was in search_results.py into its respective class Renamed webqtlDataset to DataSet/create_dataset in webqtlTrait.py, webqtlDatabaseFunction.py, and CorrelationPage.py Got search page running again for mRNA assay data sets with these changes | |||
| 2012-11-27 | Renamed webqtlDataSet.py to data_set.py | Zachary Sloan | |
| Renamed the class webqtlDataset to DataSet Finished cisLRS and transLRS search types in d_search.py Fixed parent/f1 issue in show_trait.py | |||
| 2012-11-21 | Changed parser to allow for bother square brackets and parentheses | Zachary Sloan | |
| Changed show_trait.coffee to get the stats table working again Still need to get stats table to work with changed values | |||
| 2012-11-21 | Trimmed a large amount of code from search_results.py | Zachary Sloan | |
| Removed everything related to drawing html; finished code for getting info for Phenotype and Genotype result tables Did some more with CisLRS and TransLRS searches Put something in parser about using square brackets as well as parentheses Edited template for other table types (Geno and Pheno) | |||
| 2012-11-16 | Made small change to parser to have it detect square brackets '[' along with | Zachary Sloan | |
| round ones '('; need to ask Sam about rewriting the regular expression stuff Trimmed a lot of code from search_results.py | |||
| 2012-11-09 | Did some work with adding code for LRS-related searches | Zachary Sloan | |
| 2012-11-02 | Created search objects for GeneRIF and GeneWiki searches | Zachary Sloan | |
| Got search results to display Refactored the template for show_trait page | |||
| 2012-11-01 | Changed the if/elif statements for the different dataset types to | Zachary Sloan | |
| use a dictionary instead | |||
| 2012-11-01 | Began integrating do_search.py's DoSearch object into search_results.py, | Zachary Sloan | |
| with simple searches returning correct results Still need to make results display in the table Sam also did some work with the bootstrap styling | |||
| 2012-10-31 | Did work with writing the search page query functions for some ProbeSet and ↵ | Zachary Sloan | |
| Phenotype searches | |||
| 2012-10-30 | Worked on search_result.py code related to adding clause item to queries | Zachary Sloan | |
| Continued work on redesigning the trait data page design | |||
| 2012-10-30 | Did some work converting show_trait.html to using bootstrap for styling | Zachary Sloan | |
| 2012-10-26 | Changed search page appearance using bootstrap | Zachary Sloan | |
| Headers/information displays correctly for single mRNA expression trait searches | |||
| 2012-10-26 | Put footer/head into base.html; was previously just in index_page.html | Zachary Sloan | |
| 2012-10-26 | Got search page working for mice with a single gene search | Zachary Sloan | |
| 2012-10-25 | Worked on search page code; got to the part that actually does the search | Zachary Sloan | |
| Renamed RISet and cross to "group" throughout webqtlDataset.py and search_results.py | |||
| 2012-10-25 | Created header and set defaults for the search dropdown options | Zachary Sloan | |
| 2012-10-25 | Got the Make Default option working on the home page | Zachary Sloan | |
| 2012-10-25 | Looks like the code that imports logging was changed in runserver.py | Zachary Sloan | |
| Small change to the code printing out fd in search_results.py | |||
| 2012-10-24 | Now builds json datastructure for menus correctly | Zachary Sloan | |
| 2012-10-23 | Worked on the "Make Default" cookie code | Zachary Sloan | |
| 2012-10-23 | Finished coffeescript that handles the home page dataset selection dropdowns | Zachary Sloan | |
| 2012-10-19 | Finished gen_select_dataset.py which generates the json file that defines the | Zachary Sloan | |
| data structure used for the index page select dropdowns | |||
| 2012-10-19 | Reindented genSelectDatasetJS as gen_select_dataset | Zachary Sloan | |
| 2012-10-18 | Tried to make sense of existing code in select_dataset_menu.js/coffee, ↵ | Zachary Sloan | |
| decided to make data structure reasonable and rewrite coffeescript | |||
| 2012-10-18 | Fixed spacing on coffeescript file | Zachary Sloan | |
| 2012-10-18 | small changes | Zachary Sloan | |
| 2012-10-18 | Converted selectDatasetMenu.js code to coffeescript as ↵ | Zachary Sloan | |
| dataset_select_menu.coffee Copied the menu variables from selectDatasetMenu.js as dataset_select_items.js | |||
| 2012-10-17 | Fixed bug in an SQL query, changed search field id from "ORkeyword" to ↵ | Zachary Sloan | |
| "search_terms" | |||
| 2012-10-12 | New home page beginning to look good | Zachary Sloan | |
| 2012-10-12 | Continued work on new_index_page | Zachary Sloan | |
| 2012-10-12 | Changed export code to use csv module | Zachary Sloan | |
| 2012-10-12 | Finished getting trait data to export as a download prompt | Zachary Sloan | |
| Sam worked on the new index page model that uses bootstrap | |||
| 2012-10-11 | Worked with the export code and Sam worked on a redesigned index page | Zachary Sloan | |
| 2012-10-11 | Got sample table data from the trait page sent to the export python code | Zachary Sloan | |
| 2012-10-10 | Finished the remove samples by index validation | Zachary Sloan | |
| 2012-10-10 | Got the validation code for remove samples by index mostly working | Zachary Sloan | |
| 2012-10-10 | Changed the appearance of the trait data table options using bootstrap | Zachary Sloan | |
| 2012-10-10 | Got a rudimentary version of the validation code for block samples by index ↵ | Zachary Sloan | |
| completed | |||
| 2012-10-10 | Committing before removing some attempted validation code for the trait data ↵ | Zachary Sloan | |
| page | |||
| 2012-10-09 | Used tidyp to improve/beautify index_page.html | Zachary Sloan | |
| 2012-10-09 | Removed error related to LEFT in the html of index_page.html | Zachary Sloan | |
| 2012-10-09 | Changed button and text field/dropdown appearance | Zachary Sloan | |
| 2012-10-09 | Downloaded bootstrap and added it to base.html | Zachary Sloan | |
| Made a few more changes to search_results.py code | |||
| 2012-10-09 | Fixed parser for two regular (no parenthesis, =, or :) in a row | Zachary Sloan | |
| Began improving and rewriting portions of search_results.py | |||
| 2012-10-09 | Wrote coffeescript for the functions Hide No Value, Reset, and Hide Outliers | Zachary Sloan | |
| Added data attribute to input fields to store the original value for the Reset function Began replacing search_results.py parsing code with parser.py's parse function | |||
| 2012-10-05 | Parsing code can now split input into key (GO, LRS, etc), seperator (=, :) | Zachary Sloan | |
| and value (the numbers, etc to the right of the = or : | |||
| 2012-10-05 | Worked on rewriting search page parsing code. | Zachary Sloan | |
| Downloaded jquery validation code to use with the block index feature on the trait data page (as well as others in the future). | |||
| 2012-10-05 | Began changes to search result page python code | Zachary Sloan | |
| 2012-10-03 | Finishing getting the exclude by attribute value function working | Zachary Sloan | |
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| GeneNetwork (2nd generation) |
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