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2020-11-26add doc string for render_markdown in wqflask/markdown_routes.pyAlexander Kabui
2020-11-26pep8 format for blue_print,url_prefixAlexander Kabui
2020-11-26delete environment endpoint in wqflask/views.pyAlexander Kabui
2020-11-26PEP8 format and remove unnecessary commentsAlexander Kabui
2020-11-26refactor render_markdown function in wqflask/markdown_routes.pyAlexander Kabui
2020-11-26add and register facilities blueprintAlexander Kabui
2020-11-26add facilities pageAlexander Kabui
2020-11-26delete environments html pagEAlexander Kabui
2020-11-26add table extension to support conversion of markdown tables to HTMLAlexander Kabui
2020-11-26add and register environments blueprintAlexander Kabui
2020-11-26remove environment from /wqflask/views.pyAlexander Kabui
2020-11-26add environment markdownAlexander Kabui
2020-11-26add re-used css to markdown.css for easy maintenance and reusabilityAlexander Kabui
2020-11-26add links pageAlexander Kabui
2020-11-26add endpoint for polices,environments and policiesAlexander Kabui
2020-11-26add edit button in glossary pageAlexander Kabui
2020-11-26register view,policies blueprintAlexander Kabui
2020-11-26add policies pageAlexander Kabui
2020-11-26build url for functionsAlexander Kabui
2020-11-26add css for containerAlexander Kabui
2020-11-26remove static views form wqflask/view.pyAlexander Kabui
2020-11-26delete templates/links pageAlexander Kabui
2020-11-26move css to markdown and add referencesAlexander Kabui
2020-11-26delete reference html pageAlexander Kabui
2020-11-25Fixed the "Reset Columns" button to work with the new way of showing/hiding ↵zsloan
columns (that no longer uses DataTables buttons plug-in)
2020-11-26modify github buttonAlexander Kabui
2020-11-26modify references linksAlexander Kabui
2020-11-26register references blueprintAlexander Kabui
2020-11-26add reference markdown and github buttonAlexander Kabui
2020-11-25Added actual code for coloring manhattan plot differently to ↵zsloan
display_mapping_results.py
2020-11-25Added code for passing around form parameters related to manhattan plot ↵zsloan
coloration to run_mapping.py and views.py
2020-11-25Added form options for changing manhattan plot color scheme + added ↵zsloan
necessary imports and hidden inputs
2020-11-25Removed an unused console.timeEnd in the JSzsloan
2020-11-25Substituted CDN link to the font-awesome CSS with the local guix profile linkzsloan
2020-11-25Merge pull request #489 from Alexanderlacuna/fix-referencesBonfaceKilz
Fix broken UI
2020-11-24- Fixed the "Block by Attribute Value" featurezsloan
- Changed the "Block by Attribute Value" feature and the "Filter by Value" feature to only work on columns that are numeric or have a small number of distinct values (respectively)
2020-11-24Added JS for Filter Samples by Value feature and removed a few unused lineszsloan
2020-11-24Added html/css for new "Filter Samples by Value" feature and changed a ↵zsloan
couple class names to make more sense for being shared between both this feature and "Block Samples by Index"
2020-11-24solve issues to do with decoding in python3Alexander Kabui
2020-11-23Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testingzsloan
2020-11-23Changed correlation matrix cells for traits with zero shared samples to ↵zsloan
instead say N/A and be a shade of grey
2020-11-20Replace mockobject with dataclassesBonfaceKilz
* wqflask/tests/unit/wqflask/test_markdown_routes.py (MockRequests404): Use dataclasses. (MockRequests200): Ditto.
2020-11-20Update tests to use new gn2-docs urlBonfaceKilz
2020-11-20Replace mistunes with markdown libraryBonfaceKilz
* wqflask/wqflask/markdown_routes.py (render_markdown): Use markdown library instead of mistunes.
2020-11-20Point url for fetching md content to gn-docs repoBonfaceKilz
* wqflask/wqflask/markdown_routes.py (render_markdown): Use gn-docs URL to fetch markdown content.
2020-11-20Remove glossary markdown templateBonfaceKilz
* wqflask/wqflask/static/markdown/: Delete folder. Files moved to https://github.com/genenetwork/gn-docs
2020-11-19Removed lines that check that all traits are part of the same group,zsloan
since it might be the case in the future that different groups still share sample names (and it's not really necessary since we check how many samples are shraed between each individual pair of traits)
2020-11-18Fixed issue where the cofactor trait descriptions didn't work correctlyzsloan
for genotype/snp cofactors (the code previously only accounted for probeset/phenotype cofactors, so it was treating genotypes/snps like phenotype traits)
2020-11-18Changed default Low/High colors for the correlation scatterplot cofactorzsloan
coloring to Blue/Red respectively (was originally Light Grey/Black)
2020-11-18Added some jquery closing the "Add To Collection" colorbox window afterzsloan
its form is submitted
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