| Age | Commit message (Collapse) | Author |
|---|
|
|
|
|
|
|
|
|
|
|
|
Created css file to hold modal padding
|
|
Going to simplify the code next
|
|
|
|
|
|
|
|
trait type (was the opposite before Rob commented on it earlier
today)
|
|
|
|
|
|
|
|
|
|
|
|
shapes to Tony
|
|
|
|
|
|
|
|
Wrote function in dataset.py that gets all the traits in a dataset
and their sample values
|
|
make the results easier to navigate
|
|
Code that processes subset of snps works, in process of
putting into a class
|
|
|
|
Added server port to configuration file
|
|
|
|
statements
Continued work on file that processes each individual chunk of the snp iterator/plink input
|
|
and writes/reads eachitem in the plink_input
|
|
|
|
|
|
|
|
Reverted temp_data.py to previous version that doesn't include
the "part" input (for chunks)
Made change to lmm related to splitting main iterator into chunks
Deleted a bunch of unnecessary commented out code from show_trait.py
|
|
|
|
we might decide to store it differently
|
|
|
|
|
|
for HLC datasets
Still need to read in file
|
|
|
|
|
|
|
|
chunks algorithms' accuracy/speed
|
|
list into a given number of chunks
|
|
that caused one too many chunks to be created
|
|
(to be used on the list of snps for the LMM code)
|
|
|
|
lmm.py into a separate function
|
|
Edited generate_probesetfreeze_file.py to try running it on the dataset
with incorrect regression lines
|
|
Fixed a couple bugs with quick_search_table.py
|
|
|
|
Added option to limit results based on lod score (which also
changes the y-axis of the plot)
|
