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2021-01-14Re-added some code that was accidentally removed that was needed for adding ↵zsloan
cofactors to mapping
2021-01-11Fixed error with JS that adds text to footer showing how long it took to ↵zsloan
render the page
2021-01-11Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testingzsloan
2021-01-11Added something to line accounting for certain BXD individual groups when ↵zsloan
building the correlation drop-down
2021-01-11Merge branch 'testing' into feature/add_location_type_correlation_optionzsloan
2021-01-06Merge branch 'testing' of github.com:genenetwork/genenetwork2 into ↵zsloan
feature/pass_sample_vals_as_json
2021-01-06Added line to views.py to fixes error if the genotype file contains samples ↵zsloan
not listed in the DB
2021-01-06Merge pull request #535 from zsloan/feature/pass_sample_vals_as_jsonzsloan
Feature/pass sample vals as json
2021-01-06Changes to the way R/qtl deals with 4-way crosses so it will work with new ↵zsloan
HET3-ITP genotypes
2021-01-06remove commentsAlexanderkabui
2021-01-06update tests for snp_browserAlexanderkabui
2021-01-06fix tests for show_corr_resultsAlexanderkabui
2021-01-06replace scroller/css/scroller.dataTables.min.css with ↵Alexanderkabui
scrollerStyle/css/scroller.dataTables.min.css
2021-01-06refactor tests and pep8 formattingAlexanderkabui
2021-01-06modify get_header testsAlexanderkabui
2021-01-06replace vars with vars_obj which is a function name in pythonAlexanderkabui
2021-01-06add tests for type checkingAlexanderkabui
2021-01-06add tests for snp browserAlexanderkabui
2021-01-06modify tests for show_corr_resultsAlexanderkabui
2021-01-06pep8 formatting in wqflask/api/test_mapping.pyAlexanderkabui
2021-01-06pep8 formatting and refactoring testsAlexanderkabui
2021-01-06modify tests for calculate correlation resultsAlexanderkabui
2021-01-06replace assertEqual with assertAlmostEqual for floatsAlexanderkabui
2021-01-06add test for calculating correlation resultsAlexanderkabui
2021-01-06add tests for getting sample_r and p valuesAlexanderkabui
2021-01-06add test for map_api in api/test_mapping.pyAlexander Kabui
2021-01-06refactor code in correlation/correlation_functionsAlexander Kabui
2021-01-06add test in api/mappingAlexanderlacuna
2021-01-06add correlation testAlexanderlacuna
2021-01-06add unit testsfor api/correlation.pyAlexanderlacuna
2021-01-06add unit tests for api/mapping.pyAlexanderlacuna
2021-01-06Merge pull request #404 from Uditgulati/snp_browser_changesBonfaceKilz
WIP: Snp browser changes
2021-01-05Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testingzsloan
2021-01-05Fixed issue where normalization method wasn't removed from stats figure axis ↵zsloan
titles when table values are reset
2021-01-05add server side class unit testsuditgulati
2021-01-05Merge branch 'testing' of https://github.com/genenetwork/genenetwork2 into ↵uditgulati
snp_browser_changes
2021-01-04Removed logging line from init_genome_browser.jszsloan
2021-01-04Only show Add button and run change_buttons function when genotypes are ↵zsloan
databased
2021-01-04Added call to change_buttons to mapping results table (which deals with ↵zsloan
highlighting rows and enabling the Add (to collection) button Also added a "check_node" paramter to change_buttons since sometimes the checkbox is in the second node instead of the first when it's preceded by blank text
2021-01-04Removed some logging from stats.jszsloan
2021-01-04Removed Scatterplot Matrix since it isn't working and wasn't really used to ↵zsloan
begin with
2021-01-04Increased the top margin on the trait page Bar Chart, which should prevent ↵zsloan
the chart options from overlapping with the title
2021-01-04Removed logging line from draw_probability_plot.jszsloan
2020-12-29Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testingzsloan
2020-12-29Used a try/catch to deal with situations where there's no SE/var column, ↵zsloan
since apparently var_nodes wasn't undefined, causing the previous check to not work
2020-12-29Merge branch 'testing' of github.com:genenetwork/genenetwork2 into ↵zsloan
feature/pass_sample_vals_as_json
2020-12-29Added location_type to the list of inputs to correlation page (a list of ↵zsloan
form inputs the correlation page needs is passed with it so it doesn't get unrelated form inputs)
2020-12-29update tests for run gemmaAlexanderkabui
2020-12-28Incorporated location_type into the filtering logic for the correlation pagezsloan
2020-12-28Added JS controlling which location_type options are available depending ↵zsloan
upon the selected target dataset