Age | Commit message (Collapse) | Author | |
---|---|---|---|
2013-12-05 | Now trims selected trait's values by the samples of the primary trait and | Zachary Sloan | |
gets their distinct values Created function that creates a dictionary of distinct values and their corresponding colors | |||
2013-12-05 | Interval map graph now works properly | Zachary Sloan | |
Tried to export trait data for "color by trait" function | |||
2013-11-28 | Adding to collection now shows collection you added to and has informative ↵ | Sam | |
message as to how many traits added. | |||
2013-11-27 | Clicking a trait in "color by trait" now gets all of its sample values | Zachary Sloan | |
that will be used to color the bar graph | |||
2013-11-27 | Can now view trait list of a collection after clicking the collection | Zachary Sloan | |
in the modal that pops up after clicking "Color by Trait" above the bar chart | |||
2013-11-26 | Made some progress towards getting the traits inside a collection to display ↵ | Zachary Sloan | |
on hover | |||
2013-11-25 | Merge branch 'temp' | Zachary Sloan | |
2013-11-25 | Got the interval mapping results into a table | Zachary Sloan | |
2013-11-22 | Add color picker | Lei Yan | |
2013-11-22 | Did some work towards getting the interval mapping page working | Zachary Sloan | |
2013-11-20 | Merge /home/zas1024/gene | Lei Yan | |
2013-11-20 | Created a box plot | Zachary Sloan | |
Made the bar chart use a gradient if colored by something with more than 6 distinct values Put figures in tabs under the Charts/Figures part of the trait page | |||
2013-11-14 | Can change the parameters of Sample Correlation Scatterplot | Lei Yan | |
2013-11-05 | Merge /home/zas1024/gene | Lei Yan | |
Conflicts: wqflask/wqflask/templates/correlation_page.html | |||
2013-11-05 | Add Correlation Scatter plot | Lei Yan | |
2013-11-01 | In the process of opening a modal with the collection page inside | Zachary Sloan | |
2013-11-01 | In the process of adding the function to color bar chart by the | Zachary Sloan | |
values of a trait in your collection | |||
2013-11-01 | Merge /home/sam/gene | Zachary Sloan | |
2013-11-01 | Made the extra attribute bar chart coloring continue to work | Zachary Sloan | |
when the user sorts and gave the option to revert to no coloring | |||
2013-10-31 | Refactored login code and got remember me working | Sam | |
2013-10-31 | Implemented superuser and switching users for debugging purposes | Sam | |
2013-10-30 | More work on collections | Sam | |
2013-10-30 | Got coloring by attribute working for the bar chart | Zachary Sloan | |
2013-10-30 | In process on view.html for user_collections | Sam | |
2013-10-30 | Progress on user collections | Sam | |
2013-10-25 | Began working on color coding bar chart by extra attributes | Zachary Sloan | |
2013-10-24 | Added a dynamically resortable bar chart to the trait page | Zachary Sloan | |
Improved the look/feel of the correlation page somewhat | |||
2013-10-23 | Adding new collections works | Sam | |
2013-10-22 | Bunch of work on collections and user management | Sam | |
2013-10-17 | Sample objects are now passed to js_data for drawing the correlation | Lei Yan | |
scatter plot | |||
2013-10-17 | Merge /home/zas1024/gene | Lei Yan | |
Conflicts: wqflask/wqflask/views.py | |||
2013-10-17 | Added file for the correlation scatterplot and added the @app | Lei Yan | |
to views.py Added the link to the corr plot page to the correlation page template | |||
2013-10-16 | Added interval_mapping to views.py | Zachary Sloan | |
Made some more changes to interval_mapping.py | |||
2013-10-16 | security code cleanup | Sam | |
2013-10-15 | Merge /home/zas1024/gene | Sam | |
2013-10-15 | Password reset now works...but needs some error checking still | Sam | |
2013-10-15 | Before getting rid of query_string in DecodeUser | Sam | |
2013-10-15 | Changed templates to call the header macro | Zachary Sloan | |
Correlation page now works with Non-BXD (or whatever group) or All Samples options | |||
2013-10-15 | * Redid mail sending service to set a ping showing it's alive | Sam | |
* Redid server so it wouldn't start unless mail service recently pinged * Wrote a bunch of forgot password code * Refactored sending email about verification and forgotten passwords | |||
2013-10-11 | Merge /home/sam/gene | Lei Yan | |
2013-10-11 | Merge /home/sam/gene | Zachary Sloan | |
2013-10-11 | Small changes around logging in | Sam | |
2013-10-11 | Merge /home/lei/gene | Zachary Sloan | |
Conflicts: wqflask/maintenance/quick_search_table.py | |||
2013-10-10 | Almost have correlation working for non-primary strain/group | Lei Yan | |
There's just some issue with parents/f1s not being included if you select non-BXD (or whatever the group is). All Samples, however does work. | |||
2013-10-09 | Improved some of the code related to the correlation page | Lei Yan | |
For example, changed the two functions getting gene symbols and ids for a dataset into one function that can take a column name as a parameter | |||
2013-10-08 | Literature correlation works when it is selected as the sorted | Lei Yan | |
correlation type (that is, when it is run again all traits in a database) Added a function to data_set.py that gets all the gene_ids in the data set. Not sure if having a separate function for getting the gene_ids and another for getting the gene symbols makes sense. | |||
2013-10-08 | Did some work with interval mapping page; will use qtl reaper to do | Zachary Sloan | |
the mapping, since it is reliable/fast and avoids us having to rewrite from scratch using something like r/qtl | |||
2013-10-07 | Worked on logins, session_ids, flash messages, etc. | Sam | |
2013-10-06 | Before writing login code | Sam | |
2013-10-03 | Much more progess on logging in: | Sam | |
* Verifying emails now works * Redid user manager |