index
:
genenetwork2
acenteno
authentication_test
blatseq_fix
chores/code-refactoring
chores/lmdb-integration
chores/replace-cdns
chores/script-textfile-generator
correlations-return-fewer-results
debug-too-many-connections-error
decouple_tools_and_wqflask_app
development
epysode
feature/search-history
feature/textfile-generator
gn-master
guix-shell
hook-up-auth-to-traits-page
itp_covariate_testing
jupyter_notebooks_ui
lmdb-code/refactoring
master
notebooks_api
oauth2-migrate-user-details-and-data
partial-correlations
partial_corr_ui_rework
pcorrs_targets
penguin2
phewas
production
proxy-integration
refactor-configurations
refactor-data_set_py-20220920
revert-366-360_update_htmlgen
rework-genotype-linking
run-corrs-in-external-process
stable
testing
GeneNetwork (2nd generation)
about
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Author
2013-05-17
Added flask_security locally
Sam
2013-05-17
More working on security templates
Sam
2013-05-16
Switching between login and register working pretty well
Sam
2013-05-16
Made the first level of quick search tabs species, followed by
Zachary Sloan
2013-05-16
Before trying a new modal window
Sam
2013-05-10
Sign in template looking even better
Sam
2013-05-10
Sign in template looking pretty good
Sam
2013-05-10
More security changes
Sam
2013-05-10
Have the beginnings of a user_manager working
Sam
2013-05-09
Just added some print statements so I can show matrix/vector
Zachary Sloan
2013-05-09
Added original security templates (so we can change them)
Sam
2013-05-09
Working on user registration
Sam
2013-05-08
Merge branch 'flask' of git://github.com/leiyan/genenetwork into flask
Zachary Sloan
2013-05-08
Worked on correlation page
Lei Yan
2013-05-07
Made some progress adding species/group tabs to the quick search result page to
Zachary Sloan
2013-05-02
Got quick search code running (but not displaying properly)
Zachary Sloan
2013-04-30
Merge branch 'flask' of git://github.com/leiyan/genenetwork into flask
Zachary Sloan
2013-04-30
Changed path to log file
Lei Yan
2013-04-30
Did a little with correlation_plot.py
Zachary Sloan
2013-04-26
Added file that checks how much time is added to a loop's runtime by print st...
Zachary Sloan
2013-04-24
Began writing code that writes some objects used in LMM to redis
Zachary Sloan
2013-04-24
Added original pylintrc
Zachary Sloan
2013-04-24
Checking in quick_search_table.py before using pylin
Zachary Sloan
2013-04-24
Fixed issue with the part of quick_search_table.py that loads phenotype traits
Zachary Sloan
2013-04-23
Created file correlation_plot.py for the correlation scatterplot
Zachary Sloan
2013-04-19
Fixed the issue with the x-axis coordinates for marker regression plot
Zachary Sloan
2013-04-18
The plink_input is split into chunks that are stored in temp_data, but
Zachary Sloan
2013-04-18
LMM code now reads in gzipped pickled plink snp iterator object
Zachary Sloan
2013-04-18
input file is now loaded by pickle
Zachary Sloan
2013-04-17
Created file with pickled SNPIterator (from input.py) data
Zachary Sloan
2013-04-17
Added a benchmark for running the chunks code on the list of snps
Zachary Sloan
2013-04-17
Renamed chunk_test.py to chunks.py
Zachary Sloan
2013-04-17
Updated chunk_test.py
Zachary Sloan
2013-04-17
Added chunk_test.py which compared my/ and sam's split into
Zachary Sloan
2013-04-17
Wrote code that tests the effectiveness of the function that divides a
Zachary Sloan
2013-04-17
Fixed small issue with the divide_into_chunks function
Zachary Sloan
2013-04-16
Wrote functions that divide a list into a specified number of chunks
Zachary Sloan
2013-04-16
Checking in before making some changes
Zachary Sloan
2013-04-16
Put most of the code calculating human association statistics in
Zachary Sloan
2013-04-11
Fixed a bug with quick_search_table.py
Zachary Sloan
2013-04-10
Created template for quick search page
Zachary Sloan
2013-04-09
Have quick search working for phenotypes
Zachary Sloan
2013-04-09
Nick's code works fine with human data
Zachary Sloan
2013-04-05
Loading bar now correctly shows the time to completion
Zachary Sloan
2013-04-05
Made change to nginx config file that seems to have fixed the
Zachary Sloan
2013-04-05
Got Nick's code working with the MDP datasets under the BXD group,
Zachary Sloan
2013-04-05
Made changes to get pylmm code working with HMDP datasets
Zachary Sloan
2013-04-02
Finished adding code that uses the plink genotype data if
Zachary Sloan
2013-04-02
Committing before splitting code that runs pylmm with plink files
Zachary Sloan
2013-04-02
pylmm code is running for human data (plink .bed genotype files)
Zachary Sloan
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