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genenetwork2
acenteno
authentication_test
blatseq_fix
chores/code-refactoring
chores/lmdb-integration
chores/replace-cdns
chores/script-textfile-generator
correlations-return-fewer-results
debug-too-many-connections-error
decouple_tools_and_wqflask_app
development
epysode
feature/search-history
feature/textfile-generator
gn-master
guix-shell
hook-up-auth-to-traits-page
itp_covariate_testing
jupyter_notebooks_ui
lmdb-code/refactoring
master
notebooks_api
oauth2-migrate-user-details-and-data
partial-correlations
partial_corr_ui_rework
pcorrs_targets
penguin2
phewas
production
proxy-integration
refactor-configurations
refactor-data_set_py-20220920
revert-366-360_update_htmlgen
rework-genotype-linking
run-corrs-in-external-process
stable
testing
GeneNetwork (2nd generation)
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Author
2016-04-20
Remove dbdoc
pjotrp
2016-04-20
Removed symlinks
pjotrp
2016-04-20
r-wgcna: Fix paths
pjotrp
2016-04-20
More hard-coded
pjotrp
2016-04-20
[PATCH 050/100] Using out-of-tree storage. Added comments for plink,
Pjotr Prins
2016-04-20
[PATCH 049/100] SNP_PATH: removal
Pjotr Prins
2016-04-20
[PATCH 047/100] This commit moves the image generation dir *outside* the git ...
Pjotr Prins
2016-04-20
external program should fail on return value not zero
pjotrp
2016-04-20
[PATCH 045/100] Reverted on previous changes. With a corrected
Pjotr Prins
2016-04-20
Minor fixes
pjotrp
2016-04-20
[PATCH 042/100] Sanitizing locations
Pjotr Prins
2016-04-20
[PATCH 041/100] Fixes for running tools
Pjotr Prins
2016-04-20
When a sample does not exist we should not set sample_data to None. Better to...
pjotrp
2016-04-20
-a
Pjotr Prins
2016-04-20
-a
Pjotr Prins
2016-04-20
[PATCH 037/100] WebQtlConfig: sanitizing naming and used vars
Pjotr Prins
2016-04-20
Settled on the _COMMAND syntax over _RUN
pjotrp
2016-04-20
With missing samples to not add them to the result set
pjotrp
2016-04-20
This threw an error when sample is missing in the DB.
pjotrp
2016-04-20
[PATCH 033/100] Refactored file searching
Pjotr Prins
2016-04-20
[PATCH 032/100] file locating: error checking is built-in
Pjotr Prins
2016-04-20
Fine tuning file locating
pjotrp
2016-04-20
tools.py: add function locate_without_error
pjotrp
2016-04-20
[PATCH 027/100] Introduce tools.locate
Pjotr Prins
2016-04-20
[PATCH 026/100] Introducing cached values PYLMM_COMMAND,
Pjotr Prins
2016-04-20
Introducing TEMPDIR
pjotrp
2016-04-20
[PATCH 024/100] Sanitizing file handling
Pjotr Prins
2016-04-20
[PATCH 023/100] WIP fixing all paths
Pjotr Prins
2016-04-20
Remover dependency to logger_tree (may reintroduce later)
pjotrp
2016-04-20
[PATCH 018/100] Find external tools: refactored code to work with GNU Guix
Pjotr Prins
2016-04-20
Removed import htmlgen as is not used (apparently)
pjotrp
2016-04-19
Merge branch 'master' of github.com:genenetwork/genenetwork2 into development
zsloan
2016-04-18
Additive effect lines are now separated by chromosome (like the qtl line in t...
zsloan
2016-04-14
Fixed issue where qtl lines in interval mapping wouldn't connect between chro...
zsloan
2016-04-13
Moved the code getting the description/location because it was throwing an er...
zsloan
2016-04-13
Global search should be able to return description and location columns now
zsloan
2016-04-13
All the datatables stuff should be passable by AJAX now, just need to figure ...
zsloan
2016-04-12
Fixed order of columns in AJAX-loading global search and added trait link
zsloan
2016-04-11
Changing global gene search to use gsearch_gene.html instead of gsearch_gene_...
zsloan
2016-04-11
Figured out how to load results into dataTable using AJAX, but still need to ...
zsloan
2016-04-11
Changed the way trait data is retrieved for the global search page (it now ge...
zsloan
2016-04-07
Added option to change the maximum y-axis value for GN1 mapping figure
zsloan
2016-04-07
Permutation figure and x-axis label should change to correctly reflect the ma...
zsloan
2016-04-07
SNP Track option should now work for GN1 mapping figure
zsloan
2016-04-06
The option to switch between LRS and LOD for the GN1 mapping figure should no...
zsloan
2016-04-06
Setting lodm to always be 1.0 fixes the issue where it would incorrectly disp...
zsloan
2016-04-06
Permutations (suggestive/significant lines, legend, and histogram) should now...
zsloan
2016-04-05
Bootstrap test should now work correctly for qtl reaper mapping method on ful...
zsloan
2016-04-05
Fixed issue where haplotype analyst option would appear when using genetic(ce...
zsloan
2016-03-30
Disabled Haplotype Analyst option if mapping scale is centimorgan/genetic
zsloan
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