| Age | Commit message (Collapse) | Author | |
|---|---|---|---|
| 2020-04-28 | Track requests and check for attribute so at least we get the right error:penguin2 | Pjotr Prins | |
| GeneNetwork penguin2:genenetwork2:2.11-rc2-penguin2-0bca65695 http://gn2-test3.genenetwork.org/ ( 1:31PM UTC Apr 28, 2020) MISCONF Redis is configured to save RDB snapshots, but is currently not able to persist on disk. Commands that may modify the data set are disabled. Please check Redis logs for details about the error. (error) File "/home/wrk/opt/genenetwork2/lib/python2.7/site-packages/redis/connection.py", line 717, in read_response | |||
| 2020-04-28 | menu | Pjotr Prins | |
| 2020-04-22 | Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testing | zsloan | |
| 2020-04-22 | Fixed a variety of issues related to users registering and logging in | zsloan | |
| GN2 should now work when Redis is empty | |||
| 2020-04-21 | Update tutorials.html | acenteno | |
| Updated to v7 | |||
| 2020-04-21 | Update base.html | acenteno | |
| Change position to tutorials link | |||
| 2020-04-21 | Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testing | zsloan | |
| 2020-04-21 | Update tutorials.html | acenteno | |
| Fix the title header | |||
| 2020-04-21 | Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testing | zsloan | |
| 2020-04-21 | Create tutorials.html | acenteno | |
| Link to the actual power point presentation | |||
| 2020-04-21 | Update views.py | acenteno | |
| Add tutorials link under News | |||
| 2020-04-21 | Update base.html | acenteno | |
| 2020-04-17 | Added text for Range search to the search result page | zsloan | |
| 2020-04-16 | Fixed issue that caused submitted traits to not open properly when submitted ↵ | zsloan | |
| to a group with case attributes + fixed a link to GN1 | |||
| 2020-04-16 | Changed and re-ordered tools on View Collection page in the same way as the ↵ | zsloan | |
| search result and correlation pages | |||
| 2020-04-16 | Many changes, including: | zsloan | |
| - Added permutation strata option for R/qtl - Made a variety of aesthetic changes to collections-related pages - Made a variety of aesthetic changes to the multi-trait tool options on the search result and correlation pages - Made some functional changes to collections that prevent duplicate traits and ensure new traits are at the top - The "Default Collection" is now always at the bottom of the collection list and renamed to "Your Default Collection" | |||
| 2020-04-16 | Made change that causes new traits to be at the top of a collection + ↵ | zsloan | |
| prevents duplicates | |||
| 2020-04-13 | Changed Locus to Marker in table and fixed an issue with trying to zoom in ↵ | zsloan | |
| on a chromosome after downloading permutation results | |||
| 2020-04-13 | Fixed issue that caused export for HET3-ITP traits to not work due to the ↵ | zsloan | |
| backslash in one of the case attribute names + added a couple links for stats table items | |||
| 2020-04-06 | Added Mean column for phenotype traits in search and global search result tables | zsloan | |
| 2020-04-04 | Changed Y axis on permutation histogram from Frequency to Count | zsloan | |
| 2020-04-04 | Updated R/qtl description text | zsloan | |
| 2020-04-04 | Added Chart Studio back to trait page Plotly figures and switched the ↵ | zsloan | |
| PNG/SVG download icons; also upgraded Plotly, though I'm sure we'll want to move that out of git later | |||
| 2020-04-04 | Indices on the trait page sample table are now static, to allow for ↵ | zsloan | |
| selecting ranges of indices after sorting a column | |||
| 2020-04-03 | Added option to select cofactors from collection for R/qtl | zsloan | |
| Fixed some issues with displaying the R/qtl results from the RData HET3-ITP dataa | |||
| 2020-04-03 | Fixed permutation histogram to show correct LRS/LOD measure on X axis | zsloan | |
| 2020-04-02 | Fixed a dumb issue that broke the buttons on trait list pages like search ↵ | zsloan | |
| results or correlation results | |||
| 2020-04-01 | Forgot to rearrange search result page buttons in previous commit, plus ↵ | zsloan | |
| fixed an issue where .csv was missing from some filenames | |||
| 2020-04-01 | Adding export option to correlation page | zsloan | |
| Added ability to control in code the export file name Reorganized View Collection options | |||
| 2020-03-27 | Fixed issue where GEMMA wasn't showing up for certain groups | zsloan | |
| 2020-03-27 | Temporary fix for issue with RData rqtl results having shifted postiions | zsloan | |
| 2020-03-27 | Added integration for using RData files with R/qtl, plus some other changes ↵ | zsloan | |
| to how it decides which mapping methods to display on the trait page | |||
| 2020-03-25 | Added fix for issue when creating collections (related to hmac import change) | zsloan | |
| 2020-03-19 | Made a minor change just to help qtlreaper deal with genotype files with ↵ | zsloan | |
| positions in bases instead of megabases | |||
| 2020-03-15 | Fixed digits issue, though still need to figure out how to increase gap ↵ | zsloan | |
| between y axis and title | |||
| 2020-03-12 | Added back a library that is apparently used for the Copy To Other ↵ | zsloan | |
| Collection feature | |||
| 2020-03-12 | Made some changes to how the mapping Y axis is determined/drawn; left in the ↵ | zsloan | |
| commented-out old code until we're sure this works well | |||
| 2020-03-11 | Fixed issue that caused authors to be displayed incorrectly sometimes | zsloan | |
| 2020-03-10 | Added back macaque monkey to dropdown generation, not sure why it was ↵ | zsloan | |
| removed; need to ask Rob | |||
| 2020-03-10 | Fixed issue that caused some problems when verifying hmac | zsloan | |
| 2020-03-09 | It seems that the cause might be that my user session was still active on ↵ | zsloan | |
| production, which made the logic not work | |||
| 2020-03-09 | Made change that hopefully fixes the Redis issue in production; I think it's ↵ | zsloan | |
| because HGETALL returns an empty list instead of None | |||
| 2020-03-09 | I think I found the issue; I only saw it on production instead of my branch ↵ | zsloan | |
| because it was tied to a session expiring | |||
| 2020-03-09 | Change that might fix issue on production | zsloan | |
| 2020-03-09 | Added the option to change collection names | zsloan | |
| Remooved a couple imports that weren't used | |||
| 2020-03-09 | I think this should complete consolidating all the collections code. | zsloan | |
| 2020-03-03 | I made a pretty big mistake removing this file; I forgot that it was still ↵ | zsloan | |
| used for some collection stuff | |||
| 2020-03-03 | Missed one more reference in helper_functions | zsloan | |
| 2020-03-03 | And needed to remove duplicate hmac file; I somehow didn't notice that only ↵ | zsloan | |
| one of those needed to be used | |||
| 2020-03-03 | Forgot to replace code referring to hmac function user_manager | zsloan | |
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