| Age | Commit message (Expand) | Author |
|---|
| 2016-05-13 | Fixed path for IM bar plot | Pjotr Prins |
| 2016-05-13 | Removing ref. to HTMLPATH | Pjotr Prins |
| 2016-05-13 | WebqtlConfig.py: Constant handling | Pjotr Prins |
| 2016-05-13 | Fix paths for images | Pjotr Prins |
| 2016-05-10 | Merge branch 'master' of github.com:genenetwork/genenetwork2 into merge_zach | Pjotr Prins |
| 2016-04-29 | Fixed database link in trait page details | zsloan |
| 2016-04-29 | Also fixed links in statistics section (for normal probability plot) and remo... | zsloan |
| 2016-04-29 | Fixed links in correlation descriptions on trait page and removed target=_bla...•••Fixed javascript so description changes when user changes the method and "Type" option is removed for literature correlation
| zsloan |
| 2016-04-29 | URL: removed _blank from first URL | Pjotr Prins |
| 2016-04-29 | Updated mailing list URL | Pjotr Prins |
| 2016-04-29 | Plotting: using cairo-png for headless environments | Pjotr Prins |
| 2016-04-29 | Merge | Pjotr Prins |
| 2016-04-28 | Added option to export permutation results for mapping page•••Added data_scale to dataset objects and basic stats table will now check data scale when calculating range
Made interval analyst results table work with datatables
Changed the appearance of the basic stats table some by giving it a border
| zsloan |
| 2016-04-28 | Changed the defunct GeneRIF URL to a working Wikipedia URL (which•••also points to the non-working NCBI link)
| Pjotr Prins |
| 2016-04-26 | Interval mapping: fix font and image path | Pjotr Prins |
| 2016-04-26 | Merging with Zach's latest branch | Pjotr Prins |
| 2016-04-25 | Interval Analyst table mostly working, just need to work out a few more things | zsloan |
| 2016-04-22 | Fixed issue where manhattan plot setting wasn't being carried over to single ...•••Removed a useless "if 1 == 1" line that was in marker_regression_gn1.py for testing.
| zsloan |
| 2016-04-20 | Interval Mapping now correctly does interval mapping if Marker Regression isn...•••Changed "Manhattan Plot" label to "Marker Regr." to accurately reflect what the option does
| zsloan |
| 2016-04-20 | Added borders to stats table in trait page | zsloan |
| 2016-04-20 | Fix typo | Pjotr Prins |
| 2016-04-20 | A few fixes to get the webserver running again | Pjotr Prins |
| 2016-04-20 | Add file | Pjotr Prins |
| 2016-04-20 | trasnform to transform | DannyArends |
| 2016-04-20 | Changed the file stem of generated pictures to CTL | DannyArends |
| 2016-04-20 | Adding small figures per trait, so that users can see CTL and QTL for each in... | DannyArends |
| 2016-04-20 | Adding parameters, and passing them to the CTL algorithm | DannyArends |
| 2016-04-20 | Working on the output template of CTL | DannyArends |
| 2016-04-20 | Updates to the CTL code adding the significant results to the result object | DannyArends |
| 2016-04-20 | Cleaning code, adding comments | DannyArends |
| 2016-04-20 | Adding the lineplot image to the output | DannyArends |
| 2016-04-20 | Adding code to do initial CTL mapping (working on the BXD) | DannyArends |
| 2016-04-20 | Parsing the names of the individuals, and coding H as -999 | DannyArends |
| 2016-04-20 | Minor changes to the CTL setup template | DannyArends |
| 2016-04-20 | Using the geno parser to get/parse the genotypes for the dataset | DannyArends |
| 2016-04-20 | Adding the geno file parser from Zach | DannyArends |
| 2016-04-20 | Creating the analysis object and passing results to the results template | DannyArends |
| 2016-04-20 | [PATCH 082/100] Testing passing information between the templates | DannyArends |
| 2016-04-20 | Loading the library and mapping the scan function | DannyArends |
| 2016-04-20 | Connecting the CTL analysis to the collection overview, by adding a button | DannyArends |
| 2016-04-20 | Adding initial file to perform CTL analysis | DannyArends |
| 2016-04-20 | [PATCH 078/100] Adding empty templates for CTL in GN2 | DannyArends |
| 2016-04-20 | Cleaning up the WGCNA parameter input template | DannyArends |
| 2016-04-20 | [PATCH 061/100] Put R/qtl .cross file in TMPDIR | Pjotr Prins |
| 2016-04-20 | Show error when GENODIR is missing | Pjotr Prins |
| 2016-04-20 | Remove dbdoc | pjotrp |
| 2016-04-20 | Removed symlinks | pjotrp |
| 2016-04-20 | r-wgcna: Fix paths | pjotrp |
| 2016-04-20 | More hard-coded | pjotrp |
| 2016-04-20 | [PATCH 050/100] Using out-of-tree storage. Added comments for plink,••• gemma.
| Pjotr Prins |
