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AgeCommit message (Expand)Author
2020-05-06Disable saving of RDataDanny Arends
2020-05-06Fix the covariate, added debug, more output to track what it is doingDanny Arends
2020-05-04Working on covariate mapping, making sure the addcovars are numericDanny Arends
2020-04-29Adding some debug, so we have some info in the outputDanny Arends
2020-04-29Fixing loading of the ITP data as a 4way cross, worked on http://gn2-test3.ge...Danny Arends
2020-04-28Remove old menu filePjotr Prins
2020-04-28Merge with conflictsPjotr Prins
2020-04-28Track requests and check for attribute so at least we get the right error:... GeneNetwork penguin2:genenetwork2:2.11-rc2-penguin2-0bca65695 http://gn2-test3.genenetwork.org/ ( 1:31PM UTC Apr 28, 2020) MISCONF Redis is configured to save RDB snapshots, but is currently not able to persist on disk. Commands that may modify the data set are disabled. Please check Redis logs for details about the error. (error) File "/home/wrk/opt/genenetwork2/lib/python2.7/site-packages/redis/connection.py", line 717, in read_response penguin2Pjotr Prins
2020-04-28menuPjotr Prins
2020-04-27Added timeout for when/if it does the REST API query, so it doesn't hang inde...zsloan
2020-04-27Made change that should allow dataset structure to be loaded from Redis inste...zsloan
2020-04-26Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testingPjotr Prins
2020-04-26Updated menuPjotr Prins
2020-04-26Merge master and testingmasterPjotr Prins
2020-04-26Removed the code that was still writing the database menu JSONzsloan
2020-04-24Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testingzsloan
2020-04-24Replaced hard-coded instances of GN2 urls with ones pulled from settings filezsloan
2020-04-24Merge pull request #381 from acenteno/testing...Add colleagues - credits linkzsloan
2020-04-24Made a fix that should prevent the issue where new datasets cause an error wh...zsloan
2020-04-23Changed Trait to Marker for the stats table when the trait is a genotype traitzsloan
2020-04-23Fixed issue where covariates weren't being passed when zooming in or remapping...Added loading paage for zooming/remapping Added temporary option for checking mapping scale in .geno files zsloan
2020-04-23Removed a line that was excluding Macaque from the drop-downs (and thus from ...zsloan
2020-04-22Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testingzsloan
2020-04-22Fixed a variety of issues related to users registering and logging in...GN2 should now work when Redis is empty zsloan
2020-04-21Update base.html...At the end of this text in the footer, it should read ....Jintao Wang, Robert W. Williams, and colleagues. We need to add Saunak Sen in the list right by Pjotr Prins. The link at the end to "colleagues" is broken.acenteno
2020-04-21Update views.py...Add credits linkacenteno
2020-04-21Create credits.html...Colleagues credit pageacenteno
2020-04-21Update base.html...Fix footer colleagues link to creditsacenteno
2020-04-21Update tutorials.html...Updated to v7acenteno
2020-04-21Update base.html...Change position to tutorials linkacenteno
2020-04-21Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testingzsloan
2020-04-21Update tutorials.html...Fix the title headeracenteno
2020-04-21Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testingzsloan
2020-04-21Create tutorials.html...Link to the actual power point presentationacenteno
2020-04-21Update views.py...Add tutorials link under Newsacenteno
2020-04-21Update base.htmlacenteno
2020-04-17Added text for Range search to the search result pagezsloan
2020-04-16Fixed issue that caused submitted traits to not open properly when submitted ...zsloan
2020-04-16Changed and re-ordered tools on View Collection page in the same way as the s...zsloan
2020-04-16Many changes, including:...- Added permutation strata option for R/qtl - Made a variety of aesthetic changes to collections-related pages - Made a variety of aesthetic changes to the multi-trait tool options on the search result and correlation pages - Made some functional changes to collections that prevent duplicate traits and ensure new traits are at the top - The "Default Collection" is now always at the bottom of the collection list and renamed to "Your Default Collection" zsloan
2020-04-16Made change that causes new traits to be at the top of a collection + prevent...zsloan
2020-04-13Changed Locus to Marker in table and fixed an issue with trying to zoom in on...zsloan
2020-04-13Fixed issue that caused export for HET3-ITP traits to not work due to the bac...zsloan
2020-04-06Added Mean column for phenotype traits in search and global search result tableszsloan
2020-04-04Changed Y axis on permutation histogram from Frequency to Countzsloan
2020-04-04Updated R/qtl description textzsloan
2020-04-04Added Chart Studio back to trait page Plotly figures and switched the PNG/SVG...zsloan
2020-04-04Indices on the trait page sample table are now static, to allow for selecting...zsloan
2020-04-03Added option to select cofactors from collection for R/qtl...Fixed some issues with displaying the R/qtl results from the RData HET3-ITP dataa zsloan
2020-04-03Fixed permutation histogram to show correct LRS/LOD measure on X axiszsloan
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